DRSC/TRiP Functional Genomics Resources

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Protein Alignment tyn and let-653

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001021336.2 Gene:let-653 / 178120 WormBaseID:WBGene00002827 Length:812 Species:Caenorhabditis elegans


Alignment Length:803 Identity:156/803 - (19%)
Similarity:253/803 - (31%) Gaps:264/803 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LSLYECQGWCREEADCQAAAFSFVVNPLSPSQETHCQLQNDSSAANPSAAPQRSANM-------- 115
            |||..||..|           |...:|:||.::..|      :|.|..|:|...:::        
 Worm    48 LSLKGCQSAC-----------SLGEDPVSPGKQLEC------AAVNHQASPDGFSHLCAVFQPHQ 95

  Fly   116 ---------------YYMIKLQLRSENVCHRPWSFERVPNKVIRGLDNALIYTSTK---EACLSA 162
                           :|. |..|.|...|...::|..:.::.:.  ..::|..:||   |.|||.
 Worm    96 LQNVDGYVEADDRFTFYW-KYCLPSTRKCSGEYAFTYLSDRYMD--QKSVIKWTTKANLEECLSD 157

  Fly   163 CLNERRFVCRSVEYDYNNMKCVLSDSDRRSSGQFVQLVDAQG--TDYFENLCLKPAQA------C 219
            ||:|:.|.|||:.::..:..|.:|...:.|..:.::|.:...  .||:||.|...:::      |
 Worm   158 CLDEKSFECRSISFNRTDGGCHMSKDSQISRPEAIRLNNNPNYRIDYYENNCYNLSESFTFKHEC 222

  Fly   220 KNNRSFGNSQKMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACEIESEFLCRSFLYLGQP-QG 283
            ::|       .:.||.:....|.|..|                  .:...|.||:     :| :.
 Worm   223 RDN-------GISVSVKSRLPYTGAIY------------------GLYDFFTCRT-----EPKEA 257

  Fly   284 SQYNCRLYHLDHKTLPDGPS---TYLNHERPL-----IDHGEPIGQYF--------ENQCEKAAG 332
            ::::   :...::|:....|   .|..:|..|     .|..||:  ||        :.:| ..:|
 Worm   258 TEFD---HFFPYQTVSKNCSDSIKYKGNEMVLEVVLSTDGIEPL--YFITPEDLTYQAKC-PISG 316

  Fly   333 LGAGSPPGT-----------------------LDKI-------DTLPVSLDTIED---------- 357
            :.|..|..|                       |.|.       :|.|:.|.|..:          
 Worm   317 VKAKDPANTKSSAHLDNRNKAMEASAHALFELLSKTGDDEALQNTFPLPLTTTTEVIRQVTTTTK 381

  Fly   358 -PNLTNLTR-----------------------------------NDVNCDKTGTCYDVSVHCKDT 386
             |:.|..|:                                   .......|.|....|     |
 Worm   382 KPSTTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTS-----T 441

  Fly   387 RIAVQVRTNKPFN-------------------------GRIYALGRSETCNIDV----------- 415
            .|.....|.||.|                         .|::......|..|||           
 Worm   442 TIPPSTTTRKPANPRRSTIMSATSKVAIIVGKDSSFARARLFTTKHPSTQKIDVPTTTVQTSTTV 506

  Fly   416 -INSDAFRLDLTMAGQDCNTQSVTGVYSNTVVLQHHSVVMTK--------ADKIYKVKCTYDMSS 471
             ..........|...:...|::.|...|.|.|.......:|.        |....|...:...|.
 Worm   507 PTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSP 571

  Fly   472 KNITFGM-MPIRDPEMIHINSSPEAPPPRIRILDT---RQREVETVRIGDR--LNFRIEIPEDTP 530
            :..|..: .|......:..:.|..|..|::.::..   ..:.||.|.:|.:  |:||...|....
 Worm   572 QTTTTHVGAPASSVASVAHDGSTLAGKPKVPVIFDIFHNGQPVEAVVVGTKISLSFRPHYPIPPE 636

  Fly   531 YGIFARSCVAMAKDARTSFK----IIDDDGCPTD------PTIFPGFTADGNALQSTYEAFRFTE 585
            | :..|.|.....|.:..::    .|..||||.|      |.....|.|     :.:.||||:..
 Worm   637 Y-VDVRGCQVEPIDPKYEWEHEPLFIIRDGCPADGVGLVCPPTHSEFGA-----KVSVEAFRYQT 695

  Fly   586 SYGVIFQCNVKYC-LGPCEPAVCEWNMDSFESLGRRRRRSIESNDTKSEDDMNISQEILVLDFGD 649
            :..|.:.|.|:.| ..||....|:.......|...|.||.:...|.|...:.|..   |...||.
 Worm   696 TGQVQYSCLVRICPFAPCPKNTCDDVEGCDSSYMHRYRRELSLEDIKKALEANPE---LASQFGI 757

  Fly   650 EKREFFKADPSTDFAKDKTVTII 672
            ....|.: :||    |.|..|.:
 Worm   758 SPSAFAR-NPS----KSKNFTSV 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052 11/37 (30%)
PAN_AP_HGF 131..210 CDD:238532 21/83 (25%)
PAN_1 236..327 CDD:394981 17/107 (16%)
ZP 382..598 CDD:214579 54/276 (20%)
let-653NP_001021336.2 PAN_AP_HGF 124..208 CDD:238532 22/85 (26%)
ZP <606..727 CDD:214579 32/126 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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