DRSC/TRiP Functional Genomics Resources

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Protein Alignment tyn and cut-6

DIOPT Version :10

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_499400.2 Gene:cut-6 / 176520 WormBaseID:WBGene00000853 Length:572 Species:Caenorhabditis elegans


Alignment Length:376 Identity:82/376 - (21%)
Similarity:136/376 - (36%) Gaps:86/376 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 CKDTRIAVQVRTNKPFNGRIYALG--RSETCNIDVIN-SDAFRLDLTMAGQDCNTQ-----SVTG 439
            |...||.|:..|.:||.|.::.:.  ..|.|...... .|:..:.||:....||..     :..|
 Worm   234 CGPDRIGVKASTKQPFEGNVFVMDHYHDEECRAGPEKFPDSRSIGLTVPFSACNVHRYRSLNPKG 298

  Fly   440 VYSN-TVVLQHHSVVMTKADKIYKVKCTYDMSSKNIT-----------FGMMPIRDPEMIHI--N 490
            ::.. ::|...||:.|||.|:..||:|.|..:.|::|           |.....:.|:..:.  .
 Worm   299 IFVEVSIVFMFHSLFMTKTDQTVKVQCFYMEADKHVTVPLSVSMITTVFREQIYQMPQCAYTLRK 363

  Fly   491 SSPEAPPPRIRILDTRQREVETVRIGDRLNFRIEIPE------DTPYGIFARSC-VAMAKDARTS 548
            .:|:.|..|...|            |:.:..|.|..|      || :|:...|| |......|..
 Worm   364 GAPDGPIVRFATL------------GESVYHRWECIEVEGADKDT-FGMLVHSCYVDNGYGDRVD 415

  Fly   549 FKIIDDDGCPTDPTIF--PGFTADGNALQSTYEAFRFTESYGVIFQCNVKYCL---GPCE----P 604
              |:|.:||..|..:.  |.:..........|..|::.:...:.|||.:..||   |.||    |
 Worm   416 --ILDSNGCGLDAVLLSTPDYDTSLRLATKPYHVFKYADRPVLQFQCQITLCLKYDGGCEGITPP 478

  Fly   605 AVCEWNMDSFESLGRRRRRSIESNDTKSEDDMNISQEILVLDFGDEKREFFKADPSTDFAKDKTV 669
            ..|               :.:...|..........:..||....|.....   |..||     :|
 Worm   479 QNC---------------KKLPGEDGHHHHHHPEKRRKLVRRLADGVGTI---DVFTD-----SV 520

  Fly   670 TIIE-------PCP---TKTSVLALAVTCALMILLYISTLFCYYMKKWMQP 710
            |::|       |.|   ..|::..:.:.....|.::|.|::..:.|:..:|
 Worm   521 TVLEQEPACQQPLPYPLINTNLWIMGIITLTNIFVFILTVWFTFRKRRCKP 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:433846
PAN_AP_HGF 131..210 CDD:238532
PAN_1 236..327 CDD:459635
ZP 382..598 CDD:214579 57/245 (23%)
cut-6NP_499400.2 VWA 47..208 CDD:459670
ZP 233..480 CDD:214579 63/260 (24%)
Blue background indicates that the domain is not in the aligned region.

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