DRSC/TRiP Functional Genomics Resources

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Protein Alignment tyn and dpy-1

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_001370799.1 Gene:dpy-1 / 175342 WormBaseID:WBGene00001063 Length:1427 Species:Caenorhabditis elegans


Alignment Length:368 Identity:78/368 - (21%)
Similarity:130/368 - (35%) Gaps:46/368 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 EDPNLTNLTR--NDVNCDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGRSETCNIDVINS 418
            |.|.:...||  |....:.:|.   :.:.|......|||.....|.|.....|..:........|
 Worm  1025 ESPEVLVTTRPENAETAENSGI---IDLECVGDGFKVQVNPPAGFRGVAVVKGYQDDARCKATAS 1086

  Fly   419 DAFRLDLTMAGQDCNTQSV-----TGVYSNTVV-LQHHSVVMTKADKIYKVKCTYD------MSS 471
            .:..|:|.::..:|....|     .|:.|:.|: |.|...:.|..|:.|.::|...      :.|
 Worm  1087 SSLPLNLFISNNECGVTQVKSSDPNGLNSSLVLHLLHDDELNTAEDRAYLLQCFIGAQNQDAVVS 1151

  Fly   472 KNITFGMMPIRDPEMIHINSSPEAPPPRIRILDTRQREVETVRIGDRLNFRIEI--PEDT--PYG 532
            .|:......:...|.|.:::.|......||........|....:|..:..|.|.  ..||  .||
 Worm  1152 TNLNVVRSELAIAETISLSTLPPTCTYSIRKEGPEGPIVSRAVVGQTVWHRWECDGTNDTNQAYG 1216

  Fly   533 IFARSCVAMAKDARTSFKIIDDDGCPTDPTIFPGFTADGNALQ--STYEAFRFTESYGVIFQCNV 595
            |...||.| :.|....|..:|..||.:|..:....|...::|.  :....|...::..:.|.|.:
 Worm  1217 IQVHSCYA-SDDVERKFAFVDPRGCSSDLALLTDLTYADDSLTAWAASHVFNVHDAESLKFVCKL 1280

  Fly   596 KYCL---GPCE---PAVCEWNMDSFESLGRRRRRSIESNDTKSEDDMNISQEILVLDFGDEKREF 654
            ..|.   ..||   |..|.....:...|.:|..:.|.|.|......::.:   :.|..|      
 Worm  1281 SLCTRDGDGCEGVTPPACGNTNKTGLLLTKRLAKGINSVDEALTSALSTN---VKLTSG------ 1336

  Fly   655 FKADPSTDFAKDKTVTIIEPCPTKTSVLALAVTCALMILLYIS 697
             .:|...|..|..|.:.:      ..|:||....|::.:..:|
 Worm  1337 -SSDGLEDLLKSATSSYL------FWVVALVAVAAIVAISILS 1372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052
PAN_AP_HGF 131..210 CDD:238532
PAN_1 236..327 CDD:394981
ZP 382..598 CDD:214579 51/233 (22%)
dpy-1NP_001370799.1 VWA 823..975 CDD:395045
Zona_pellucida 1050..1299 CDD:421542 55/249 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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