DRSC/TRiP Functional Genomics Resources

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Protein Alignment tyn and cutl-9

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_496293.2 Gene:cutl-9 / 174640 WormBaseID:WBGene00010893 Length:562 Species:Caenorhabditis elegans


Alignment Length:639 Identity:134/639 - (20%)
Similarity:216/639 - (33%) Gaps:176/639 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 KVIRGLDNALI---YTS-TKEACLSACLNERRFVCR-SVEYDYNNMKC-------VLSDSDRRSS 193
            |.....|||:|   |.| .::..:...:.||.|..: .|:.||.|.:|       |.|.......
 Worm    26 KSASAFDNAIIGQPYISCQRDRIVIEVITERLFTGKVFVKGDYANPQCTKTFRNGVASSGGHIED 90

  Fly   194 GQFVQLVDAQGTDYFENLCLKPAQACKNNRSFGNSQKMGVSEEKVA-QYVGLHYYTDKELQVTSE 257
            ..|:..|......|.|: .||.::              |.|:.|:: ||......::...:..|:
 Worm    91 ETFLGTVTKSREPYVED-HLKASR--------------GSSDSKISNQYQNQKATSNTNFEHASK 140

  Fly   258 SACRLACEIESEFLCRSFLYLGQPQGSQYNCRLYHLDHKTLPDGPSTYL----NHERPLIDHGEP 318
            |...|..:.::                     .:..|..:.||...|:|    |......|.||.
 Worm   141 SGTDLGTKSKT---------------------FHENDINSAPDIAETFLLPRKNETTSDTDEGEW 184

  Fly   319 IGQYFENQCEKAAGLGAG--------------------------SPPGTLDKIDTLPVSLDTIED 357
            .|         ..|..||                          |.||:     |||:|      
 Worm   185 KG---------IGGASAGGNAIFGGTRGEELRVFGKSVTSSSTRSRPGS-----TLPLS------ 229

  Fly   358 PNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIAV-QVRTNKPFNGRIYALGRSETCNIDVINSDAF 421
                  |.:..:|....||...:...:.||.|. .:|...|.|          :||         
 Worm   230 ------TSSSPDCPPLTTCAPCACEERRTRRATNSIRLEVPLN----------SCN--------- 269

  Fly   422 RLDLTMAGQDCNTQSVTGVYSNTVVLQHHSVVMTKADKIYKVKCTYDMSSKNITFGM-MPIRDPE 485
                |...:..|..||  |.|...|:..|...:||.||.|.::|.|..:.|.::..: :.:.|.:
 Worm   270 ----TKRDRKLNPPSV--VVSLIAVVSFHDSFITKLDKAYHIQCAYAEAEKTVSTDLDVNMTDEQ 328

  Fly   486 MIHINSSPEAPPPRIRILDTRQREVETVRIGD----------RLNFRIEIPEDTPYGIFARSCVA 540
              .||.:.|.|.....|.|.....|:...:|:          .|..:::        :....|  
 Worm   329 --EINGTVEPPSCDYLISDQNGNSVQNSLVGELVRHQWVCKGGLTNKLK--------MLVHQC-- 381

  Fly   541 MAKD-ARTSFKIIDDDGCPTDPTIF--PGFTADGNALQSTYEAFRFTESYGVIFQCNVKYCL--- 599
            ..|| |...|::||..||..|..:.  |.::.||.:.|.....|:|.:...|.|:|.:.:|.   
 Worm   382 YVKDGAGQQFEVIDQHGCTLDQLMLQTPTYSEDGMSAQVDAYIFKFPDRSTVDFRCTITFCSVDD 446

  Fly   600 GPC---EPAVCEWNMDSFESLGRRRRRSIESNDTKSEDDMNISQEILVLDFGDEKREFFKADPST 661
            ..|   .|..|..|    .:|.||::||.....:.|..    :..:.|.|....|.:..:..|:.
 Worm   447 AECLDMTPPKCGAN----NNLLRRKKRSSHGLSSMSLH----ANSLTVFDIDSSKTDTNQLLPTP 503

  Fly   662 DFAKDKTVTIIEP--CPTKTSVLALAVTCALMILLYISTLFCYYMKKWMQPHKI 713
            ...: ||....|.  |.:..|...|.........:.|:.:|.|:..::  .||:
 Worm   504 ALLR-KTFEEYERTFCVSVASFGILISASTFFATISIAVIFSYFFLRF--NHKL 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052
PAN_AP_HGF 131..210 CDD:238532 20/80 (25%)
PAN_1 236..327 CDD:394981 16/95 (17%)
ZP 382..598 CDD:214579 53/230 (23%)
cutl-9NP_496293.2 ZP 244..460 CDD:214579 57/252 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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