DRSC/TRiP Functional Genomics Resources

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Protein Alignment tyn and T26C5.2

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_495968.3 Gene:T26C5.2 / 174465 WormBaseID:WBGene00012032 Length:595 Species:Caenorhabditis elegans


Alignment Length:615 Identity:126/615 - (20%)
Similarity:192/615 - (31%) Gaps:236/615 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RPWSFERVPNKVIRGLDNALIYTS-----TKEACLSACLNERRFVCRSVEYDYNNMKCVLSDSDR 190
            || .|||.||   ..|.|...|.|     |::.||..|. :....||||.|              
 Worm    22 RP-CFERYPN---HRLVNVRPYHSEWRMKTEDMCLLFCA-QSASRCRSVVY-------------- 67

  Fly   191 RSSGQFVQLVDAQGTDYFENLCLKPAQACKNNRSFGNSQKMGVSEEKVAQYVGLHYYTDK----- 250
                           |..:::|                                ||::|:     
 Worm    68 ---------------DTVQHIC--------------------------------HYFSDEGVDQA 85

  Fly   251 -------ELQVTSESACRLACEIESEFLCRSFLYLGQPQGSQYNCRLYHLDHKTLPDGPSTYLNH 308
                   .|:|.|:|..:.:.||.|:           |:.|.             ||.|.|.|.:
 Worm    86 ILSAKMTYLRVVSQSCLQESSEIASD-----------PKTSP-------------PDAPPTLLPN 126

  Fly   309 ERPLIDHGEPIGQYFENQCEKAAGLGAGSPPGTLDKIDTLPVSLDTIEDPNLTNLTRNDVNCDKT 373
            ....|:         |.|.:....|....||...::|.:...|:.  |.......|:..:|.|: 
 Worm   127 SFNSIN---------EIQQDIHEELAIPQPPTEEEQITSTEASIP--EVVTFETATQEAMNNDE- 179

  Fly   374 GTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGRSETCNIDVINSDAFRLDLTM----------A 428
                |::|          |.|.|||   :.....||..|||..:.|| .|...|          |
 Worm   180 ----DLAV----------VTTEKPF---VPPTSTSENVNIDEEDLDA-ELKSVMEQPSQFTGSFA 226

  Fly   429 GQDCNTQSVTGVY-SNTVVLQHHSVVMTKAD-KIYKVKCTY-----DMSSKNITFGMMPIRDPEM 486
            ..|....: .||| ..|...|.....|.|.| |..:.|.:.     |:.::|        :|...
 Worm   227 DSDAQIDN-NGVYRDKTSSEQRWMNSMEKMDVKPSETKKSIDEKLEDLKTEN--------KDKYE 282

  Fly   487 IHINSSPEAPPPRIRILDTRQREVETVRIGDRLNFRIEI-------------------------P 526
            :.:.:|.|:.|         :..|||.::.:.|.:..::                         |
 Worm   283 MLMGTSQESDP---------EVAVETQKLKNNLRYGAKVIKFDEEAAFRKQSELRRKPVGAKRRP 338

  Fly   527 EDTPYGIFARSCVAMAK-------DARTSFKIIDDDGCPTDPTIFPGFTADGNALQSTYEAFRFT 584
            :..|..|.:.|.:..||       :...:..||:.:....|..::..|.   |:.|:       .
 Worm   339 DLKPVTISSTSYIQKAKSFLDEVNEEEENENIIETECQQDDVDVWIAFE---NSAQA-------E 393

  Fly   585 ESYGVIFQCNVKYCLGP----CEPAVCEWNMDSFESLGRRRRRSIESNDTKSEDDMNISQEILVL 645
            ||..|....||     |    ||....|.|..|:....:.....:   .||| |.:.|...    
 Worm   394 ESENVDIDSNV-----PNKRECEKICKEKNCRSYTYFEKTHTCHL---STKS-DGVTIKAP---- 445

  Fly   646 DFGDEKREFFKADPSTDFAKDKTVTIIEPC 675
            ..||     |.|..||.|...:|.::.:.|
 Worm   446 PSGD-----FTATTSTKFCYPRTFSVFDGC 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052
PAN_AP_HGF 131..210 CDD:238532 21/83 (25%)
PAN_1 236..327 CDD:394981 19/102 (19%)
ZP 382..598 CDD:214579 53/264 (20%)
T26C5.2NP_495968.3 PAN_AP 22..>79 CDD:214680 24/122 (20%)
PAN_1 385..459 CDD:278453 25/101 (25%)
PAN_AP_HGF <496..553 CDD:238532
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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