DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tyn and cutl-13

DIOPT Version :9

Sequence 1:NP_001027032.1 Gene:tyn / 3354987 FlyBaseID:FBgn0284435 Length:715 Species:Drosophila melanogaster
Sequence 2:NP_490736.2 Gene:cutl-13 / 171637 WormBaseID:WBGene00021025 Length:445 Species:Caenorhabditis elegans


Alignment Length:421 Identity:84/421 - (19%)
Similarity:140/421 - (33%) Gaps:113/421 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 VHCKDTRIAVQVRTNKPFNGRIYALG--RSETCNIDVINSDAFRLDLTMAGQDCNTQ-------- 435
            :.|....|.....|..||.|.:|..|  |:..|....:..:......|:...||..:        
 Worm    29 LQCNPESITFSFNTRNPFIGNVYIRGFYRTPGCRRQFLAPNQAGGSFTVRLGDCGMRRSRQISGH 93

  Fly   436 SVTGVYSN-TVVLQHHSVVMTKADKIYKVKCTYDMSSKNITFGMMPIRDPEMIHINSSPEAP--- 496
            |..||..: |.|...|..:.||.::.:.::|.|..|...:...         :.::|.||..   
 Worm    94 SPRGVNQHITFVANFHPNLATKEERSFNIRCFYAHSESVVKAD---------LDVSSMPEESFEQ 149

  Fly   497 ----PPR----IRILDTRQREVETVRIGDRLNFRIEIPEDTPYGIFARSCVAMAKDARTSFKIID 553
                .|:    :|.......:|...|:|..:..|.:......|||..|.|..:......||.::|
 Worm   150 GVTIVPQCTYSLREGTFEGPKVSNTRVGMTIVHRWDCDTSGNYGILLRGCTILDSRGVESFPLLD 214

  Fly   554 DDGCPTD---PTI--FPGFTADGNALQSTYEAFRFTESYGVIFQCNVKYC--------------- 598
            ::||...   |.:  .|..|:...|:    ||..|.:...:.|.|.:|.|               
 Worm   215 ENGCSVSRDFPQVVYLPSLTSAYMAI----EAISFPDQPSISFSCQIKLCDKGSDECRGMSPPAC 275

  Fly   599 -------------------LG------PCEPAVCEW---------NMDSFESLGRRRRR------ 623
                               :|      |.||    |         ::.:..|.|....|      
 Worm   276 TPLTQVPITGQVPMPFDNTIGNTFDGIPLEP----WMKEPSPPTDDVANITSEGEPMPRLITEEE 336

  Fly   624 --SIESNDTKSEDD------MNISQEILVLDFGDEKREFFKADPSTDFAKDKTVTIIEPCPTKTS 680
              .||||..::.:.      .||:.|.|.::...|..|........:.|:    .:.|||.:..:
 Worm   337 QYQIESNHVEAREKRFAHRLFNITSEDLYVEPTVEPMEVEMPGAPRETAR----RVSEPCVSVET 397

  Fly   681 --VLALAVTCALMILLYISTLFCYYMKKWMQ 709
              :.||||....::.:.:...|..:|.|..|
 Worm   398 FYISALAVLFVFVVSIGMVCFFGSHMLKKTQ 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tynNP_001027032.1 PAN_4 46..97 CDD:405052
PAN_AP_HGF 131..210 CDD:238532
PAN_1 236..327 CDD:394981
ZP 382..598 CDD:214579 53/242 (22%)
cutl-13NP_490736.2 ZP 30..278 CDD:214579 54/260 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X161
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.