DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED21 and SRB7

DIOPT Version :10

Sequence 1:NP_001015223.1 Gene:MED21 / 3354977 FlyBaseID:FBgn0040020 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_010594.3 Gene:SRB7 / 851903 SGDID:S000002716 Length:140 Species:Saccharomyces cerevisiae


Alignment Length:139 Identity:41/139 - (29%)
Similarity:62/139 - (44%) Gaps:27/139 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTP-------IPCPPQE---DY 55
            |.|||||||..::|..|.||..:..|.:..      .|||:....|       ...||:|   ..
Yeast     1 MTDRLTQLQICLDQMTEQFCATLNYIDKNH------GFERLTVNEPQMSDKHATVVPPEEFSNTI 59

  Fly    56 AQLFAQLIARCAKDIDTLIESLPNEDSSIELQNSSL-----KRLEIENQGTARDLEEVVQKGELL 115
            .:|...:|.: .:.|:.||:|||..|.|.|.|...:     |.:|:|::..     |.::|.|.|
Yeast    60 DELSTDIILK-TRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKI-----EAIKKKEKL 118

  Fly   116 LEKMQYSLE 124
            |..:...:|
Yeast   119 LRHVDSLIE 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED21NP_001015223.1 Med21 3..128 CDD:463241 40/137 (29%)
SRB7NP_010594.3 Med21 3..131 CDD:463241 40/137 (29%)

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