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Protein Alignment MED21 and SRB7
DIOPT Version :9
Sequence 1: | NP_001015223.1 |
Gene: | MED21 / 3354977 |
FlyBaseID: | FBgn0040020 |
Length: | 142 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_010594.3 |
Gene: | SRB7 / 851903 |
SGDID: | S000002716 |
Length: | 140 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 139 |
Identity: | 41/139 - (29%) |
Similarity: | 62/139 - (44%) |
Gaps: | 27/139 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTP-------IPCPPQE---DY 55
|.|||||||..::|..|.||..:..|.:.. .|||:....| ...||:| ..
Yeast 1 MTDRLTQLQICLDQMTEQFCATLNYIDKNH------GFERLTVNEPQMSDKHATVVPPEEFSNTI 59
Fly 56 AQLFAQLIARCAKDIDTLIESLPNEDSSIELQNSSL-----KRLEIENQGTARDLEEVVQKGELL 115
.:|...:|.: .:.|:.||:|||..|.|.|.|...: |.:|:|::.. |.::|.|.|
Yeast 60 DELSTDIILK-TRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKI-----EAIKKKEKL 118
Fly 116 LEKMQYSLE 124
|..:...:|
Yeast 119 LRHVDSLIE 127
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MED21 | NP_001015223.1 |
Med21 |
1..128 |
CDD:288119 |
41/139 (29%) |
SRB7 | NP_010594.3 |
Med21 |
1..131 |
CDD:402689 |
41/139 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C157345802 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1510 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
46 |
1.000 |
Inparanoid score |
I1876 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004699 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_104457 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13381 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.790 |
|
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