DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED21 and med21

DIOPT Version :10

Sequence 1:NP_001015223.1 Gene:MED21 / 3354977 FlyBaseID:FBgn0040020 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_998588.1 Gene:med21 / 406732 ZFINID:ZDB-GENE-040426-2763 Length:145 Species:Danio rerio


Alignment Length:135 Identity:79/135 - (58%)
Similarity:97/135 - (71%) Gaps:9/135 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTPI----PCPPQEDYAQLFAQ 61
            ||||||||||.||..|:.|||||||:||.:.|:.|.|.     ||.|    |..|.|:||||||.
Zfish     1 MADRLTQLQDAVNSLADQFCNAIGVLQQCAPPASFSNI-----QTAINKDQPSNPTEEYAQLFAA 60

  Fly    62 LIARCAKDIDTLIESLPNEDSSIELQNSSLKRLEIENQGTARDLEEVVQKGELLLEKMQYSLECI 126
            ||||.|||:|.||:|||:|:|:..||.:||::||.|||..|..|||||.:|:.||||:|.:|..|
Zfish    61 LIARTAKDVDVLIDSLPSEESTAALQAASLRQLEEENQEAAARLEEVVYRGDALLEKIQTALADI 125

  Fly   127 AQAQL 131
            ||:||
Zfish   126 AQSQL 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED21NP_001015223.1 Med21 3..128 CDD:463241 73/128 (57%)
med21NP_998588.1 Med21 3..127 CDD:463241 73/128 (57%)

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