DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MED21 and MED21

DIOPT Version :10

Sequence 1:NP_001015223.1 Gene:MED21 / 3354977 FlyBaseID:FBgn0040020 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_307937.5 Gene:MED21 / 1269314 VectorBaseID:AGAMI1_007118 Length:154 Species:Anopheles gambiae


Alignment Length:151 Identity:97/151 - (64%)
Similarity:115/151 - (76%) Gaps:17/151 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTP---------IP-------- 48
            |||||||||||||||||||||:||::||.|:||||..|||.|.|||         :|        
Mosquito     1 MADRLTQLQDTVNQQAEHFCNSIGILQQCSVPSKFAGFERTGSQTPQQQVHQQQQLPQQQQQQQQ 65

  Fly    49 CPPQEDYAQLFAQLIARCAKDIDTLIESLPNEDSSIELQNSSLKRLEIENQGTARDLEEVVQKGE 113
            ...|||:.|||:.||:||||||||||||||:|:||||||..||:|||.||:.:|..|||:|:|||
Mosquito    66 PQQQEDFPQLFSTLISRCAKDIDTLIESLPSEESSIELQVQSLQRLEAENKESAEKLEEIVRKGE 130

  Fly   114 LLLEKMQYSLECIAQAQLDMQ 134
            |||||:|.:|..|||:|||||
Mosquito   131 LLLEKIQAALSDIAQSQLDMQ 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED21NP_001015223.1 Med21 3..128 CDD:463241 88/141 (62%)
MED21XP_307937.5 Med21 3..145 CDD:463241 95/149 (64%)

Return to query results.
Submit another query.