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Protein Alignment MED21 and med21
DIOPT Version :9
Sequence 1: | NP_001015223.1 |
Gene: | MED21 / 3354977 |
FlyBaseID: | FBgn0040020 |
Length: | 142 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_031753607.1 |
Gene: | med21 / 100302398 |
XenbaseID: | XB-GENE-5719290 |
Length: | 165 |
Species: | Xenopus tropicalis |
Alignment Length: | 131 |
Identity: | 76/131 - (58%) |
Similarity: | 95/131 - (72%) |
Gaps: | 1/131 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTPIPCPPQEDYAQLFAQLIAR 65
||||||||||.:|..|:.|||||||:||.:.|:.|.|.: .|.....|..|.|:||||||.||||
Frog 1 MADRLTQLQDALNSLADQFCNAIGVLQQCAPPASFSNIQ-TGINKDQPPNPTEEYAQLFAALIAR 64
Fly 66 CAKDIDTLIESLPNEDSSIELQNSSLKRLEIENQGTARDLEEVVQKGELLLEKMQYSLECIAQAQ 130
.||||:.||:|||:|:|:..||.:||.:||.||...|..|||||.:|:|||||:|.:|..|||:|
Frog 65 TAKDIEVLIDSLPSEESTAALQAASLYQLEEENHAAAARLEEVVYRGDLLLEKIQTALADIAQSQ 129
Fly 131 L 131
|
Frog 130 L 130
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
MED21 | NP_001015223.1 |
Med21 |
1..128 |
CDD:288119 |
72/126 (57%) |
med21 | XP_031753607.1 |
Med21 |
1..127 |
CDD:402689 |
72/126 (57%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
131 |
1.000 |
Domainoid score |
I5115 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H3148 |
Inparanoid |
1 |
1.050 |
137 |
1.000 |
Inparanoid score |
I4430 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1583203at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004699 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto104935 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13381 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2635 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X5037 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
9 | 9.190 |
|
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