DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set1 and SUVR1

DIOPT Version :10

Sequence 1:NP_001015221.1 Gene:Set1 / 3354971 FlyBaseID:FBgn0040022 Length:1641 Species:Drosophila melanogaster
Sequence 2:NP_171901.3 Gene:SUVR1 / 839320 AraportID:AT1G04050 Length:734 Species:Arabidopsis thaliana


Alignment Length:947 Identity:158/947 - (16%)
Similarity:307/947 - (32%) Gaps:320/947 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   764 SKARSKPLFEKADSTVNTPLNCIKDTSYNEKNPDINLLINAHREVADFQSYSSIGLRAAMPKLPS 828
            |:.:::....|...|.....:.|::.:|       .:|::|..:.||.||               
plant    20 SETKTRAFLRKLLKTYENNWDFIEEDAY-------KVLLDAIFDEADAQS--------------- 62

  Fly   829 FRRIRKHPSPIPTKRNFLERDLSDQEEMVQRSDSDKEDSNVEISDTARSKIKGPVPI---QESDS 890
                        |::|       .:||..::.:.:|:..:|.   |:|.:.|.|.|:   :|.|.
plant    63 ------------TEKN-------KKEEEKKKKEEEKKSRSVA---TSRGRRKAPEPLVQDEEDDM 105

  Fly   891 KSHTSGLNSK---RKGSASSFFSSSSSSTSSEAEYEAIDCVEKARTSEEDSPRGYGQRNLNQRTT 952
            ......|..:   |:|.|||..|||||..:           |..:|..|:.              
plant   106 DEDEFPLKRRLRSRRGRASSSSSSSSSYNN-----------EDLKTQPEEE-------------- 145

  Fly   953 TIRNRNLVGTMDVINVRNLCSGSNEFKKENVTKRTKKNIYSDTDEDNDRTLFPALK-------EK 1010
                                                       |||:..|..|.||       |:
plant   146 -------------------------------------------DEDDGVTELPPLKRYVRRNGER 167

  Fly  1011 NISTILSDLEEISKDSCIGLDENGIEPTILRKIPNTPKLNEECRRSLTPVPPPGYNEEEIKKKVD 1075
            .::..:.:....|..|.:.::...:.|.:                 |.|..|......|....|.
plant   168 GLAMTVYNNASPSSSSRLSMEPEEVPPMV-----------------LLPAHPMETKVSEASALVI 215

  Fly  1076 CKQKPSFEYDRIYSDSEEEKEYQERRKRNTEYMAQMEREFLEEQE-----KRIEKSLDKNLQSPN 1135
            ...:|:.::..:.||:          ...:..|.:|.:..:..||     |.|.........||:
plant   216 LNDEPNIDHKPVISDT----------GNCSAPMLEMGKSNIHVQEWDWETKDILNDTTAMDVSPS 270

  Fly  1136 NIVKNNNSPRNK----NDETRKTAISQTRSCFESASKV-DTTLVNIISVENDINEFGPHEEGDVL 1195
            :.:  ..|..:|    :.|...:...:.:.|...|... :||.:::.|:| |:..        .:
plant   271 SAI--GESSEHKVAAASVELASSTSGEAKICLSFAPATGETTNLHLPSME-DLRR--------AM 324

  Fly  1196 TNGCNKMYTNSKGKTKRTQSPVYSEGGSSQASQASQVALEHCYSLPPHSVSLGDYPSGKVNETKN 1260
            ...|.|.|        :...|.:|..|..:       .:..||      :.|..      |.|..
plant   325 EEKCLKSY--------KIVHPEFSVLGFMK-------DMCSCY------IDLAK------NSTSQ 362

  Fly  1261 ILKREAENIAIVSQMTRTGPGRPRKDPICIQKKKRDLAPRMS-NVKSKMTP----NGDEWPDLAH 1320
            :|:.|.                     :|...|..|.:..:. ::...:.|    :||.|..:::
plant   363 LLETET---------------------VCDMSKAGDESGAVGISMPLVVVPECEISGDGWKAISN 406

  Fly  1321 --------KNVHFVPCDMYKTRDQNEEMVILYTFLTKGIDAED--INFIKMSYLDH--------- 1366
                    :||. :|.    ..:.||::...:.::......:|  :.|...|:.|.         
plant   407 MKDITAGEENVE-IPW----VNEINEKVPSRFRYMPHSFVFQDAPVIFSLSSFSDEQSCSTSCIE 466

  Fly  1367 --LHKE---PYAMFLNN--THWVDHCTTDRAFWPPPSKKRRKDDELIRHKTGCARTEGFYKLDVR 1424
              |..|   ..|:.::|  .:.:|....:.......|:.|.:..:::|....|. .|...|:::.
plant   467 DCLASEMSCNCAIGVDNGFAYTLDGLLKEEFLEARISEARDQRKQVLRFCEECP-LERAKKVEIL 530

  Fly  1425 EKAKHKYHYAKANTEDSFNEDRSDEPTALTNHHHNKLISKMQGISREARSNQRRLLTAFGSMGES 1489
            |..|.  |..:...::.:.:      ...|....|:::.         |....:|...|...|:.
plant   531 EPCKG--HLKRGAIKECWFK------CGCTKRCGNRVVQ---------RGMHNKLQVFFTPNGKG 578

  Fly  1490 ELLKFNQLKFRKKQLKFAKSAIHDWGLFAMEPIAADEMVIEYVGQMIRPVVADLRETKYE---AI 1551
                                    |||..:|.:.....:.||:|:::  .:.:|.:..:|   .:
plant   579 ------------------------WGLRTLEKLPKGAFICEYIGEIL--TIPELYQRSFEDKPTL 617

  Fly  1552 GI------GSSYLFRIDMETIIDATKCGNLARFINHSC-NPNCYAKVITIESEKK----IVIYSK 1605
            .:      ||......|....:|....||::||:||.| :.|.....:.:|:..:    :..::.
plant   618 PVILDAHWGSEERLEGDKALCLDGMFYGNISRFLNHRCLDANLIEIPVQVETPDQHYYHLAFFTT 682

  Fly  1606 QPIGINEEITYDYKFPLED-----EKIPCLCGAQGCR 1637
            :.|...||:.:||.....|     :...||||::.||
plant   683 RDIEAMEELAWDYGIDFNDNDSLMKPFDCLCGSRFCR 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set1NP_001015221.1 RRM_Set1 99..191 CDD:409745
U2AF_lg 255..>386 CDD:273727
N-SET 1352..1496 CDD:463344 24/161 (15%)
SET_SETD1 1490..1637 CDD:380946 32/165 (19%)
SUVR1NP_171901.3 WIYLD 6..59 CDD:431288 7/45 (16%)
SET_SETDB-like 433..696 CDD:380936 50/306 (16%)
Blue background indicates that the domain is not in the aligned region.

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