DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set1 and ASHH3

DIOPT Version :10

Sequence 1:NP_001015221.1 Gene:Set1 / 3354971 FlyBaseID:FBgn0040022 Length:1641 Species:Drosophila melanogaster
Sequence 2:NP_566010.1 Gene:ASHH3 / 819021 AraportID:AT2G44150 Length:363 Species:Arabidopsis thaliana


Alignment Length:139 Identity:54/139 - (38%)
Similarity:77/139 - (55%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly  1502 KQLKFAKSAIHDWGLFAMEPIAADEMVIEYVGQMIRPVVADLRETKYEAIGIGSSYLFRIDMETI 1566
            |::|..::.....|:.|.|.|.|.|.:|||||::|.....:.|..|.:..|..:.||..|..:.:
plant   116 KKMKLIQTEKCGSGIVAEEEIEAGEFIIEYVGEVIDDKTCEERLWKMKHRGETNFYLCEITRDMV 180

  Fly  1567 IDATKCGNLARFINHSCNPNCYAKVITIESEKKIVIYSKQPIGINEEITYDYKFPLEDEKIPCLC 1631
            ||||..||.:|:||||||||...:...|:.|.:|.|::.:.|...|.:||||:|........|.|
plant   181 IDATHKGNKSRYINHSCNPNTQMQKWIIDGETRIGIFATRGIKKGEHLTYDYQFVQFGADQDCHC 245

  Fly  1632 GAQGCRGTL 1640
            ||.|||..|
plant   246 GAVGCRRKL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set1NP_001015221.1 RRM_Set1 99..191 CDD:409745
U2AF_lg 255..>386 CDD:273727
N-SET 1352..1496 CDD:463344
SET_SETD1 1490..1637 CDD:380946 51/134 (38%)
ASHH3NP_566010.1 SET_ASHR3-like 117..255 CDD:380952 53/138 (38%)
Tudor_Agenet_AtEML-like 313..362 CDD:410475
Blue background indicates that the domain is not in the aligned region.

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