DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set1 and SUVH5

DIOPT Version :10

Sequence 1:NP_001015221.1 Gene:Set1 / 3354971 FlyBaseID:FBgn0040022 Length:1641 Species:Drosophila melanogaster
Sequence 2:NP_181061.1 Gene:SUVH5 / 818083 AraportID:AT2G35160 Length:794 Species:Arabidopsis thaliana


Alignment Length:1081 Identity:213/1081 - (19%)
Similarity:335/1081 - (30%) Gaps:415/1081 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   669 GIPSESASRLFSNGAYV------HSEYLKAVA----SFNFDSFSK--------------PYDYNK 709
            |||. |...|..||:|.      .|:..|..|    |.:|.|.::              .|:...
plant    19 GIPC-SKDELAINGSYTDPMGRRKSKRFKVAAESEFSPDFGSITRQLRSRRMQKEFTVETYETRN 82

  Fly   710 GA----LSDQNDGIRQKVKQVIGYIVEELKQILKRDVNKRMIEITAFKHFETWWDEHTSKARSKP 770
            .:    ||.|.|     |:.:.|.||.|.......|.|...:.:|.       ..|.......:|
plant    83 VSDVCVLSSQAD-----VELIPGEIVAERDSFKSVDCNDMSVGLTE-------GAESLGVNMQEP 135

  Fly   771 LFEKADSTVNTPLNCIKDTSYNEKNPDINL------------LINAHREVADFQSYSSIGLRAAM 823
            :.::     |.|.|..:........|.|:|            .|...:|:  .....|:| |...
plant   136 MKDR-----NMPENTSEQNMVEVHPPSISLPEEDMMGSVCRKSITGTKEL--HGRTISVG-RDLS 192

  Fly   824 PKLPS-FRRIRKHPSPIPTKRNFLERDLSDQEE--MVQRSDS-DKEDSNVEISDTARSKI----- 879
            |.:.| |.:..|          ..:|.:|.:||  ::::||| |....:.|:.:..:|::     
plant   193 PNMGSKFSKNGK----------TAKRSISVEEENLVLEKSDSGDHLGPSPEVLELEKSEVWIITD 247

  Fly   880 KG---PVPIQESDSKSHTSGLNSKRKGS----------ASSFFSS-----SSSSTSSEAEYEAID 926
            ||   |.|::.|:.::...|..|.||.|          ||.|..|     |.||:...|.|:..:
plant   248 KGVVMPSPVKPSEKRNGDYGEGSMRKNSERVALDKKRLASKFRLSNGGLPSCSSSGDSARYKVKE 312

  Fly   927 CV-------EKARTSEEDSPRGYGQRNLNQRTTTIRNRNLVGTMDVINVRNLCSGSNEFKKENVT 984
            .:       :|....||..||                     ..|..|.:.:|..|      .:.
plant   313 TMRLFHETCKKIMQEEEARPR---------------------KRDGGNFKVVCEAS------KIL 350

  Fly   985 KRTKKNIYSDTD--------EDNDRTLFPALKEKNISTILSDLEEISKDSCIGLD---ENGIEPT 1038
            |...||:||.|.        |..|.  |....|.|       |..|.:.|..|:|   ::|.|..
plant   351 KSKGKNLYSGTQIIGTVPGVEVGDE--FQYRMELN-------LLGIHRPSQSGIDYMKDDGGELV 406

  Fly  1039 ILRKIPNTPKLNEECRRSLTPVPPPGYNEEEIKKKVDCKQKPSFEYDRIYSDSEEEKEYQERRKR 1103
                             :.:.|...|||                                     
plant   407 -----------------ATSIVSSGGYN------------------------------------- 417

  Fly  1104 NTEYMAQMEREFLEEQEKRIEKSLDKNLQSPNNIVKNNNSPRNKNDETRKTAISQTRSCFESASK 1168
                      :.|:..:..|......|:...    |||..|:::...|...|:            
plant   418 ----------DVLDNSDVLIYTGQGGNVGKK----KNNEPPKDQQLVTGNLAL------------ 456

  Fly  1169 VDTTLVNIISVENDINEFGPHEEGDVLTNGCNKMYTNSKGKTKRTQSPV-YSEGGSSQASQASQV 1232
                       :|.||:                            ::|| ...|..:...|:|.|
plant   457 -----------KNSINK----------------------------KNPVRVIRGIKNTTLQSSVV 482

  Fly  1233 ALEHCYSLPPHSVSLGDYPSGKVNETKNILKREAENIAIVSQMTRTGPGRPR---KDPICIQKKK 1294
            |..:.|.   ....:.:|.....:..|.:.|.:...|          ||:|.   |:  ..:.||
plant   483 AKNYVYD---GLYLVEEYWEETGSHGKLVFKFKLRRI----------PGQPELPWKE--VAKSKK 532

  Fly  1295 RDLAPRMSNVKSKMTPNGDEWPDLAHKNVHFVPCDMYKTRDQNEEMVILYTFLTKGIDAEDINFI 1359
            .:....:.||  .:|...:..|..|..|:           |..:....:||             .
plant   533 SEFRDGLCNV--DITEGKETLPICAVNNL-----------DDEKPPPFIYT-------------A 571

  Fly  1360 KMSYLDHLHKEPYAMFLNNTHWVDHCTTDRAFWPPPSKKRRKDDELIRHKTGCARTEGFYKLD-- 1422
            ||.|.|               |   |.      |.|.|             .|..|.|..|..  
plant   572 KMIYPD---------------W---CR------PIPPK-------------SCGCTNGCSKSKNC 599

  Fly  1423 ---VREKAKHKYHYAKANTEDSFNEDRSDEPTALTNHHHNKLISKMQGISREARSNQRRLLTAFG 1484
               |:...|..| |..|..|        .:|.......|.|...     |...|.:|..:     
plant   600 ACIVKNGGKIPY-YDGAIVE--------IKPLVYECGPHCKCPP-----SCNMRVSQHGI----- 645

  Fly  1485 SMGESELLKFNQLKFRKKQLKFAKSAIHDWGLFAMEPIAADEMVIEYVGQMIRPVVADLRETKYE 1549
                            |.:|:..|:....||:.::|.|.....:.||.|::       |.:.:.|
plant   646 ----------------KIKLEIFKTESRGWGVRSLESIPIGSFICEYAGEL-------LEDKQAE 687

  Fly  1550 AIGIGSSYLFRI---DMETIIDATKCGNLARFINHSCNPNCYAKVITIESEK----KIVIYSKQP 1607
            ::.....|||.:   |....|:|.:.||:.|||||||:||.||:.:..:.|:    .|:.::...
plant   688 SLTGKDEYLFDLGDEDDPFTINAAQKGNIGRFINHSCSPNLYAQDVLYDHEEIRIPHIMFFALDN 752

  Fly  1608 IGINEEITYDYKFPLED--------EKIPCLCGAQGCRGTL 1640
            |...:|::|||.:.::.        :|..|.||:..|.|.|
plant   753 IPPLQELSYDYNYKIDQVYDSNGNIKKKFCYCGSAECSGRL 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set1NP_001015221.1 RRM_Set1 99..191 CDD:409745
U2AF_lg 255..>386 CDD:273727
N-SET 1352..1496 CDD:463344 25/148 (17%)
SET_SETD1 1490..1637 CDD:380946 42/161 (26%)
SUVH5NP_181061.1 SRA 360..519 CDD:197742 42/299 (14%)
SET 565..765 CDD:394802 65/291 (22%)
Blue background indicates that the domain is not in the aligned region.

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