DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set1 and SUVR5

DIOPT Version :10

Sequence 1:NP_001015221.1 Gene:Set1 / 3354971 FlyBaseID:FBgn0040022 Length:1641 Species:Drosophila melanogaster
Sequence 2:NP_001189585.1 Gene:SUVR5 / 816905 AraportID:AT2G23740 Length:1382 Species:Arabidopsis thaliana


Alignment Length:1449 Identity:260/1449 - (17%)
Similarity:443/1449 - (30%) Gaps:550/1449 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 EIDQRDRGSLKYCSRYSLHEYIETDVRRSSNTISSYYSASSLPIASHGFNSCSFPSIENIKTWSD 444
            ||.|.|..|:......:..:..:.::||:..|.:::..:.:.|......:|..|.|..|..:   
plant   297 EIAQPDSKSVFNSDVQASRKRPKLEIRRAETTNATHMESDTSPQGLSAIDSEFFSSRGNTNS--- 358

  Fly   445 RRAWTAFQPDFHPVQPP--PPPPEEIDNWD-----------------------EEEHDKNSIVPT 484
                    |:....:.|  ..|...:|.||                       :::|...|::..
plant   359 --------PETMKEENPVMNTPENGLDLWDGIVVEAGGSQFMKTKETNGLSHPQDQHINESVLKK 415

  Fly   485 HYG-------CMAKLQPPVPSNVNFATKLQSVTQPNSDPGTVDLDTRIALIFKGKTFGNAPPFLQ 542
            .:|       |:|.::......|.:|.:           |.|.....:|..|..|:..|      
plant   416 PFGSGNKSQQCIAFIESKGRQCVRWANE-----------GDVYCCVHLASRFTTKSMKN------ 463

  Fly   543 MDSSDSETDQGKPEVFSDVNSDSN--NSENKKRS------CEKNNKVLHQPNEASDISSDEELIG 599
                     :|.|.|.:.:.....  .::.|.||      |:|     |:|:..         :.
plant   464 ---------EGSPAVEAPMCGGVTVLGTKCKHRSLPGFLYCKK-----HRPHTG---------MV 505

  Fly   600 KKDKSKLSLICEKEVNDDNMSLSSLSSQE-DPIQTKEGAEYKSIMSSYMYSHSNQNP-------- 655
            |.|.|. |.:.:::|::...:|.:...|: .|....||..::           .|.|        
plant   506 KPDDSS-SFLVKRKVSEIMSTLETNQCQDLVPFGEPEGPSFE-----------KQEPHGATSFTE 558

  Fly   656 FYYHASGYGHYLSGIPSESASRLFSNGAYVHSEY--------LKAVASFNFDSFSKP--YDYNKG 710
            .:.|.|...:...|..||::....|..:..||.|        ||...:......||.  .|..:|
plant   559 MFEHCSQEDNLCIGSCSENSYISCSEFSTKHSLYCEQHLPNWLKRARNGKSRIISKEVFVDLLRG 623

  Fly   711 ALSDQN--------DGIRQKVKQVIGY---IVEELK-----------------QILKRDVNKRMI 747
            .||.:.        |...:..|.|:..   :..|::                 :.|.:.|:....
plant   624 CLSREEKLALHQACDIFYKLFKSVLSLRNSVPMEVQIDWAKTEASRNADAGVGEFLMKLVSNERE 688

  Fly   748 EITAFKHFETWWDEHTSKARSKPLFEKADSTVNTPLNCIKDTSYNEKNPDINLLINAHREVADFQ 812
            .:|....|.|..||                         :|.|.:|....:..:.|...:..|.:
plant   689 RLTRIWGFATGADE-------------------------EDVSLSEYPNRLLAITNTCDDDDDKE 728

  Fly   813 SYSSIGLRAAMPKLPSFRRIRKHPSPIPTKRNFLERDLSDQEEMVQRSD--------------SD 863
            .:|..|...|: .|.||           .:|..||..:.::.. ||.::              .|
plant   729 KWSFSGFACAI-CLDSF-----------VRRKLLEIHVEERHH-VQFAEKCMLLQCIPCGSHFGD 780

  Fly   864 KEDSNVEISDTARSKIKGPVPIQESDSKSHTSGLNSKR--KGSASSFFSSSSSSTSSEAEYEAID 926
            ||...|.:.....|:.|......|.:.   |:|..|::  .||:....|.::.:||...::....
plant   781 KEQLLVHVQAVHPSECKSLTVASECNL---TNGEFSQKPEAGSSQIVVSQNNENTSGVHKFVCKF 842

  Fly   927 C---------VEKARTSEEDSPRGYGQRNLNQ--RTTTIRNRNLVGTMDVINVRNLCSGSNEFKK 980
            |         :.:...:|...|...|.|...:  |..|.|.::  |.:         |..|:|||
plant   843 CGLKFNLLPDLGRHHQAEHMGPSLVGSRGPKKGIRFNTYRMKS--GRL---------SRPNKFKK 896

  Fly   981 E--------------NVTKRTKKNIYSDTDEDNDRTLFPALKEKNISTILSDLEEISKDSCIGLD 1031
            .              |:.:|.:.:....|:.:.:..:.|.|.:..      :.:.::...|    
plant   897 SLGAVSYRIRNRAGVNMKRRMQGSKSLGTEGNTEAGVSPPLDDSR------NFDGVTDAHC---- 951

  Fly  1032 ENGIEPTILRKI------PNTPKLNEECRRSLTPVPPPGYNEEEIKKKVDCK--QKPSFEYDRIY 1088
             :.:...:|.|:      ||...:....|.:...|        .::..::.|  ..|    ||||
plant   952 -SVVSDILLSKVQKAKHRPNNLDILSAARSACCRV--------SVETSLEAKFGDLP----DRIY 1003

  Fly  1089 SDSEEEKEYQERRKRNTEYMAQMEREFLEEQEKRIEKSLDKNLQSPNNIVKNNNSPRNKNDETRK 1153
                                                                             
plant  1004 ----------------------------------------------------------------- 1003

  Fly  1154 TAISQTRSCFESASKVDTTLVNIISVENDINEFGPHEEGDVLTNGCNKMYTNSKGKTKRTQSPVY 1218
              :...:.|.|...:|..                 |:||.:.:|||..:      |......|:.
plant  1004 --LKAAKLCGEQGVQVQW-----------------HQEGYICSNGCKPV------KDPNLLHPLI 1043

  Fly  1219 SE------GGSSQASQASQVALE----HCYSLPPHSVSLGDYPSGKVNETKNILKREAENIAIVS 1273
            ..      |.:..|.|.|.:.||    ||                 :.|..:..||...|.|::.
plant  1044 PRQENDRFGIAVDAGQHSNIELEVDECHC-----------------IMEAHHFSKRPFGNTAVLC 1091

  Fly  1274 QMTRTGPGRPRKDPICIQKKKRDLAPRMSNVKSKMTPNGDEWPDLAHKNVHFVPCDMYKTRDQNE 1338
            :....|   ....|||:                                   |..|::.:....|
plant  1092 KDISFG---KESVPICV-----------------------------------VDDDLWNSEKPYE 1118

  Fly  1339 EMVILYTFLTKGIDAEDINFIKMSY---------------LDHLHKEPYAMFLNNTHWVD----H 1384
            .....:|::|..|....::.:|.:.               .||::     :|.|:  :.|    :
plant  1119 MPWECFTYVTNSILHPSMDLVKENLQLRCSCRSSVCSPVTCDHVY-----LFGND--FEDARDIY 1176

  Fly  1385 CTTDRAFWPPPSKKRRKDDELIRHKTGCARTEGFYKLDVREKAKHKYHYAKANTEDSFNEDRSDE 1449
            ..:.|..:|...|:|            ....||:                               
plant  1177 GKSMRCRFPYDGKQR------------IILEEGY------------------------------- 1198

  Fly  1450 PTALTNHHHNKLISKMQGISREARSNQRRLLTAFGSMGESELLKFNQLKFRKKQLKFAKSAIHDW 1514
            |....|        |..|.||..   |.|:|               |...|.| |:..::....|
plant  1199 PVYECN--------KFCGCSRTC---QNRVL---------------QNGIRAK-LEVFRTESKGW 1236

  Fly  1515 GLFAMEPIAADEMVIEYVGQMIRPVVADLRETKYEAIGIGS-SYLFRID-------------MET 1565
            ||.|.|.|.....|.||:|:::....|:.|..:|   |.|. ||:..||             ::.
plant  1237 GLRACEHILRGTFVCEYIGEVLDQQEANKRRNQY---GNGDCSYILDIDANINDIGRLMEEELDY 1298

  Fly  1566 IIDATKCGNLARFINHSCNPNCYAKVITIESEKK----IVIYSKQPIGINEEITYDY---KFPLE 1623
            .||||..||::|||||||:||.....:.:||.:.    |.:|:...|...||||.||   ..|.|
plant  1299 AIDATTHGNISRFINHSCSPNLVNHQVIVESMESPLAHIGLYASMDIAAGEEITRDYGRRPVPSE 1363

  Fly  1624 DE-KIPCLCGAQGCRGTLN 1641
            .| :.||.|.|..|||.|:
plant  1364 QENEHPCHCKATNCRGLLS 1382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set1NP_001015221.1 RRM_Set1 99..191 CDD:409745
U2AF_lg 255..>386 CDD:273727 3/5 (60%)
N-SET 1352..1496 CDD:463344 21/162 (13%)
SET_SETD1 1490..1637 CDD:380946 56/168 (33%)
SUVR5NP_001189585.1 zf-C2H2_3rep 737..862 CDD:408638 26/140 (19%)
SET 1124..1381 CDD:394802 83/336 (25%)
Blue background indicates that the domain is not in the aligned region.

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