DRSC/TRiP Functional Genomics Resources

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Protein Alignment Set1 and LOC4577143

DIOPT Version :10

Sequence 1:NP_001015221.1 Gene:Set1 / 3354971 FlyBaseID:FBgn0040022 Length:1641 Species:Drosophila melanogaster
Sequence 2:XP_313355.5 Gene:LOC4577143 / 4577143 VectorBaseID:AGAMI1_013464 Length:851 Species:Anopheles gambiae


Alignment Length:908 Identity:169/908 - (18%)
Similarity:286/908 - (31%) Gaps:337/908 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   950 RTTTIRNRNLVGTMDVINVRNLCSGSNEFKKENVTKRTKKNIYSD-------------------- 994
            ::|.::   .:..:..:..:|....:...|.||::|...:.:.||                    
Mosquito    57 KSTVVK---AISGVQTVRFKNELERNITIKLENLSKSFIETLQSDAKVMEAYLHKMHEQYKSPYN 118

  Fly   995 --TDEDNDRTLFPALKEKNISTILSDLEEISKDSCIGLDENGIE--PT---------------IL 1040
              |...|..|  |:.|.|                   |..||::  ||               ..
Mosquito   119 HGTSHSNKHT--PSRKRK-------------------LSPNGLQTSPTNNGETQRMKQAKIMDFF 162

  Fly  1041 RKIP----NTPKLN---EECRRSLTPVPPPGYNEEEIKKKVDCKQKPSFEYDRIYSDSEEEKEYQ 1098
            ...|    ..|.|:   |..||...|.....::...|.|.....::.|...|::..:.:|.::..
Mosquito   163 HMSPPERITQPSLHASRERARRKSCPAAQGNFSGTHIPKPNGFPKRMSCSIDKVKKEVDESEDGS 227

  Fly  1099 ERRKRNTEYMAQMEREFLEEQEKRIEKSLDKNLQSPNNIVKNNNSPRNKNDETRKTAISQTRSCF 1163
            .........:|.:.:|.....::.|:  ::.:.::|:  ..:::|......||.||..|      
Mosquito   228 RFDVPTDTRLATINQEQATPDKQNIK--VECSDETPD--AMSSSSQVENGTETPKTTAS------ 282

  Fly  1164 ESASKVDT---TLVNIISVENDINEFGPHEEGDVLTNGCNKMYT----NSKGKTKRTQSPVYSEG 1221
               .||:.   |.|..::.:|              :||..|:.:    :.|..|.:|.:.:..|.
Mosquito   283 ---VKVENGTDTPVTPVARDN--------------SNGLLKVMSAAKPSPKTSTPKTTASIKVEN 330

  Fly  1222 GSSQASQASQVALEHCYSLPPHSVSLGDYPSGKVNETKNILKREAENIAIVSQMTRTGPGRPRKD 1286
            |:  .|.|:.|:.:....|  .:|.|...||.|...|                            
Mosquito   331 GT--VSPATPVSRDSSKGL--LNVKLAAKPSPKTPAT---------------------------- 363

  Fly  1287 PICIQKKKRDLAPRMSNVKSKMTPNGDEWPDLAHKNVHFVPCDMYKTRDQNEEMVILYTFLTKGI 1351
                .::...|:...|..|.|.|..|.....:.            |:...::|..:        .
Mosquito   364 ----GERNSSLSAGKSTPKRKSTGGGSNSKQIK------------KSATTSKEYTV--------E 404

  Fly  1352 DAEDIN------FIKMSYLDHLHKEPYAMFLNNTHWVDHCTTDRAF----------WPPP-SKKR 1399
            :.|||.      |..:.:|.:..|:.....|||   |:.|....:|          |..| .:|.
Mosquito   405 NIEDIQLVGNSPFFLVKWLGYTSKDNTWEPLNN---VNSCAMLDSFLSAQMSLLEEWVEPLQEKI 466

  Fly  1400 RKDDE----------------LIRHK--------------------TGCART--EGFYKLDVREK 1426
            |...|                |:.||                    .|..:.  |...:|..||.
Mosquito   467 RSSPEYLESLERQGSKTYQEILLEHKEYDWDQLRADLIIMAKLWMNRGRNKLIWERITRLMCREL 531

  Fly  1427 AKHKYHYAK--ANTED--SFNEDRSD-EPT---ALTNHHH-----NKLI-----SKMQGIS---- 1469
            :     |||  ...|:  .|.:..:| |||   .:.|.|.     |...     ...:|||    
Mosquito   532 S-----YAKRCEQLEELRRFEKHINDHEPTLRVVVENEHDLDAPPNNFTYLQGNIPAEGISIPND 591

  Fly  1470 -----------------------REARSNQRRLLTAFG----------SMGESELLKFNQLKFRK 1501
                                   |.|.|.::|||...|          |.|...|.:..|...:.
Mosquito   592 PPVGCECNPCTGRSTCCGKLSEGRFAYSVKKRLLLQPGAPIFECNKKCSCGPDCLNRVVQNGGKC 656

  Fly  1502 KQLKFAKSAIHDWGLFAMEPIAADEMVIEYVGQMIRPVVADLRETKYEAIGIGSSYLFRIDME-- 1564
            ....|.......||:.....|...:.:.||.|::|....|:.|..:|:|  :|.:|||.:|..  
Mosquito   657 NLTLFKTPNGRGWGVRTNTVIYEGQYISEYCGEVISYDEAEKRGREYDA--VGRTYLFDLDFNGT 719

  Fly  1565 ---TIIDATKCGNLARFINHSCNPNCYAKVITIES----EKKIVIYSKQPIGINEEITYDYKF-- 1620
               ..:||.:.||:.||.||||:|||....:.|:.    ..::..::::.|.|.||:|::|..  
Mosquito   720 DNPYTLDAARYGNVTRFFNHSCDPNCGIWSVWIDCLDPYLPRLAFFAQRRIEIGEELTFNYHAQV 784

  Fly  1621 ----------------PLE---------DEK---------------------IPCLCGAQGCR 1637
                            |::         :||                     ..||||:..||
Mosquito   785 SPNNVSINGGSGGGGPPMDGDSSTGGVVEEKPAENGDKATTANGSVRNTKGVTECLCGSANCR 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Set1NP_001015221.1 RRM_Set1 99..191 CDD:409745
U2AF_lg 255..>386 CDD:273727
N-SET 1352..1496 CDD:463344 50/253 (20%)
SET_SETD1 1490..1637 CDD:380946 46/203 (23%)
LOC4577143XP_313355.5 None
Blue background indicates that the domain is not in the aligned region.

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