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Protein Alignment Set1 and CG4565

DIOPT Version :10

Sequence 1:	NP_001015221.1	Gene:	Set1 / 3354971	FlyBaseID:	FBgn0040022	Length:	1641	Species:	Drosophila melanogaster
Sequence 2:	NP_001097743.1	Gene:	CG4565 / 41303	FlyBaseID:	FBgn0037841	Length:	269	Species:	Drosophila melanogaster

Alignment Length:	160	Identity:	45/160 - (28%)
Similarity:	78/160 - (48%)	Gaps:	17/160 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly  1495 NQLKFR--KKQLKFAKSAIH-DWGLFAMEPIAADEMVIEYVGQMIRPVVADLRETKYEAIGIGSS 1556
            |:|.:.  :|.|:...|.:: ..||.....|.....:.||.|:::....|..|....|.:|: .:
  Fly   102 NRLVYSGPRKHLEIFDSPVYGSKGLRTTAKITKGGYICEYAGELLTVPEARSRLHDNEKLGL-MN 165

  Fly  1557 YLFRID--------METIIDATKCGNLARFINHSCNPNCYAKVITIESE-KKIVIYSKQPIGINE 1612
            |:..::        ..||:|.::.||:.|::||||.|||:...:.|:.. .||.|::.:.|...|
  Fly   166 YILVLNEYTSDKKQQVTIVDPSRRGNIGRYLNHSCEPNCHIAAVRIDCPIPKIGIFAARDIAAKE 230

  Fly  1613 EITYDYKFPLEDEKI----PCLCGAQGCRG 1638
            |:.:.|....:.:|:    .|||||..|.|
  Fly   231 ELCFHYGGEGQYKKMTGGKTCLCGASKCTG 260

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.