DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40160 and Prss47

DIOPT Version :9

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_038952282.1 Gene:Prss47 / 680378 RGDID:1592951 Length:398 Species:Rattus norvegicus


Alignment Length:298 Identity:83/298 - (27%)
Similarity:128/298 - (42%) Gaps:48/298 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 NPTPLDQRP--NQPRGCGVRNTGGLDFTLSGVSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHK 199
            |..|: .||  .:|:..| :..||.| ||:         |::||..:||:.|  .:.|...||..
  Rat    65 NQDPV-TRPVCGKPKMVG-KVFGGQD-TLA---------GQWPWQASLLYRG--LHLCGAVLIDS 115

  Fly   200 QVVLTAAHCV--ESLRTGSFTVRAGEWDTQTMKERLPYQERSVQTVILHPDYNR-RSIAYDFALV 261
            ..:::.|||.  :|.....:.|..|  :.|..::....|:..|..:|.|||:.: .|...|.|::
  Rat   116 HWLVSTAHCFRNKSQAPEDYEVLLG--NNQLYQKTKHTQKIPVNHIINHPDFEKFHSFGSDIAML 178

  Fly   262 ILSQPVTLDDHINVICLPQQDDIPQPGNTCFSTGWG---------KDAFGSLGKYSSLMKRVPLP 317
            .|..||....::...|||.:|.......:|:.||||         :...||.|:....::...||
  Rat   179 QLRLPVNFTSYVVPACLPSKDTQLSNHTSCWITGWGMLSEDSKGKRSWRGSKGREKRKIRAKLLP 243

  Fly   318 ----------IVEFNSCQTRLRGTRLG-PKFALDRSFICAGG-QRGIDTCQGDGGAPLACPRGST 370
                      |:|...|.. |.|.||| .:..:....:|||| ..|...|:||.|.||.|    .
  Rat   244 PFSLQEGEVGIIENEFCNA-LYGQRLGQSRNYVHEEMLCAGGLSTGKSICRGDSGGPLVC----Y 303

  Fly   371 RESRYQQTGIVAWGIGCNDEV-PAAYANVALVRGWIDQ 407
            ..|.:...|:.:||:.|...: |:.:..|.....||.|
  Rat   304 HISAWVLVGLASWGLDCRPSIYPSVFTRVTYFTDWISQ 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 Tryp_SPc 166..408 CDD:238113 72/267 (27%)
Tryp_SPc 169..405 CDD:214473 69/260 (27%)
Prss47XP_038952282.1 Tryp_SPc 83..342 CDD:238113 77/278 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 162 1.000 Domainoid score I3893
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.