DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40160 and tpsab1

DIOPT Version :9

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_002941509.1 Gene:tpsab1 / 497002 XenbaseID:XB-GENE-5892149 Length:326 Species:Xenopus tropicalis


Alignment Length:287 Identity:81/287 - (28%)
Similarity:128/287 - (44%) Gaps:39/287 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 DQRPNQPRGCGVRNTGGLDFTLSGVSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHKQVVLTAA 206
            |..|.    ||..|.|    |......:||..|||||.||:...|.:  ||.|:|:....|||:|
 Frog    24 DAEPT----CGKSNVG----TNRIAGGHEATKGEFPWQVAVWLPGKM--FCGGTLLSNTWVLTSA 78

  Fly   207 HCVESLRTGSFTVRAGEWDTQTMK-ERLPYQERSV--QTVILHPDYNRRSIAYDFALVILSQPVT 268
            .|::.....|..|..|     ::| ...|.:|.::  :.:|:||.|...:.:.|.||:.|.:||.
 Frog    79 QCLDGHNASSVVVILG-----SIKLSGNPKEETAIPAKRIIIHPYYYFSNYSGDLALIELEKPVD 138

  Fly   269 LDDHINVICLPQQDDIPQPGNTCFSTGWGKDAFGSLGKYSSLMKRVPLPIVEFNSCQT------- 326
            ...:|..:|||.......||..|:..|||:..|......|.:::...:.::....||.       
 Frog   139 FTTYITPLCLPPPTVTFTPGQLCYVAGWGQKKFNDSEGISDVLRGAEVRLITSELCQDYYNMKND 203

  Fly   327 -RLRGTRLGPKFALDRSFICAGGQRGID-TCQGDGGAPLACPRGSTRESRYQQTGIVAWGIGCND 389
             .:.|.      .:....|||....|:. .|:||||.|||||.|::    :...|:.::.:.|.:
 Frog   204 YNITGD------VITNDTICARDIHGVHRICRGDGGGPLACPAGNS----WYVVGVASFVVLCGE 258

  Fly   390 -EVPAAYANVALVRGWIDQQMLTNGFG 415
             ..|..|.:|.....|| |:.:::..|
 Frog   259 MGHPGVYTSVPYYMDWI-QEYVSSAAG 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 Tryp_SPc 166..408 CDD:238113 72/254 (28%)
Tryp_SPc 169..405 CDD:214473 70/248 (28%)
tpsab1XP_002941509.1 Tryp_SPc 38..275 CDD:214473 70/253 (28%)
Tryp_SPc 39..277 CDD:238113 72/255 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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