DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40160 and Jon99Cii

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_524554.1 Gene:Jon99Cii / 43544 FlyBaseID:FBgn0003356 Length:265 Species:Drosophila melanogaster


Alignment Length:286 Identity:76/286 - (26%)
Similarity:111/286 - (38%) Gaps:68/286 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LNPTPLDQRPNQPRGCGVRNTGGLDFTLSGVSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHKQ 200
            |.|||:       :....|.|.|.          .|..|:.|:.|.||.|||.:::|.||:|...
  Fly    24 LTPTPI-------KDIQGRITNGY----------PAYEGKVPYIVGLLFSGNGNWWCGGSIIGNT 71

  Fly   201 VVLTAAHCVE-----------SLRT-GSFTVRAGEWDTQTMKERLPYQERSVQTVILHPDYNRRS 253
            .|||||||..           |:|| ..:|...|..|                 :|.|..||..:
  Fly    72 WVLTAAHCTNGASGVTINYGASIRTQPQYTHWVGSGD-----------------IIQHHHYNSGN 119

  Fly   254 IAYDFALVILSQPVTLDDHINVICLPQQDDIPQ--PGNTCFSTGWGKDAFGSLGKYSSLMKRVPL 316
            :..|.:| |.:..|.....:|.:.||..:|..|  .|....::|||....||  .....::.|.:
  Fly   120 LHNDISL-IRTPHVDFWSLVNKVELPSYNDRYQDYAGWWAVASGWGGTYDGS--PLPDWLQSVDV 181

  Fly   317 PIVEFNSCQTRLRGTRLGPKFALDRSFICAGGQRGIDTCQGDGGAPLACPRGSTRESRYQQTGIV 381
            .|:..:.|..         .::|..:.||.....|..||.||.|.||....|:      :..|:.
  Fly   182 QIISQSDCSR---------TWSLHDNMICINTDGGKSTCGGDSGGPLVTHDGN------RLVGVT 231

  Fly   382 AWG--IGCNDEVPAAYANVALVRGWI 405
            ::|  .||....||.::.|.....||
  Fly   232 SFGSAAGCQSGAPAVFSRVTGYLDWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 69/256 (27%)
Jon99CiiNP_524554.1 Tryp_SPc 36..260 CDD:238113 71/267 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.