DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40160 and CG17404

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_650165.2 Gene:CG17404 / 41482 FlyBaseID:FBgn0038001 Length:275 Species:Drosophila melanogaster


Alignment Length:286 Identity:81/286 - (28%)
Similarity:123/286 - (43%) Gaps:53/286 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 GVRNTGGLDFTLSGVSQNEAGF-------------GE-FPWTVALLH--SGNLSYFCAGSLIHKQ 200
            ||...||:...|:  |:..:|:             || .|:.|:|.:  .|...:||.||:|...
  Fly    11 GVVALGGVFGRLN--SRQPSGYTPHRIVGGADIPPGEHVPYQVSLQYRTRGGQMHFCGGSIIAPN 73

  Fly   201 VVLTAAHCVESLRTGSFTVRAGEWDTQTMKERLPYQERS-VQTVILHPDYNRRSIAYDFALVILS 264
            .:||||||.:.|.....:|.||   .:.:.|:   ..|| |.:..:||.| :..:..|.|::.:.
  Fly    74 RILTAAHCCQGLNASRMSVVAG---IRGLNEK---GSRSQVLSYSIHPKY-QELVTSDLAVLSIK 131

  Fly   265 QPVTLDDH-INVI-CLPQQDDIPQPGNTCFSTGWG-----KDAFGSLGKYSSLMKRVPLPIVEFN 322
            .|:.|::. |:.| ...|..|....|.....||||     ...|.....|.::::|:....:..:
  Fly   132 PPLKLNNSTISAIEYRSQGKDFVGGGVPVTLTGWGLRLPVPFPFLDNVNYPNVLQRMSYHTISNS 196

  Fly   323 SCQTRLRGTRLGPKFALDRSFICAGGQ-RGIDTCQGDGGAPLACPRGSTRESR--YQQTGIVAWG 384
            .|:      ..|.:...|.. |||.|. ||  .|.||.|.||      ..||:  .||.|||::|
  Fly   197 ECR------NAGMESVTDTE-ICARGPFRG--ACSGDSGGPL------VMESKNGLQQVGIVSYG 246

  Fly   385 -IGCNDEV-PAAYANVALVRGWIDQQ 408
             :.|...: |..|..|:....||..|
  Fly   247 LVVCGLYISPDVYTRVSTFSDWIGNQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 75/270 (28%)
CG17404NP_650165.2 Tryp_SPc 34..269 CDD:214473 71/256 (28%)
Blue background indicates that the domain is not in the aligned region.

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