DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40160 and Prss45

DIOPT Version :9

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001008864.1 Gene:Prss45 / 408244 RGDID:1303021 Length:330 Species:Rattus norvegicus


Alignment Length:248 Identity:69/248 - (27%)
Similarity:112/248 - (45%) Gaps:32/248 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 FPWTVALLHSGNLSYFCAGSLIHKQVVLTAAHCVES-----LRTGSFTVR--AGEWDTQTMKERL 233
            :||.|:|....  .:.|.|:||.:..|::||||::.     :..||.|::  ...|..     ::
  Rat    61 WPWEVSLQIEN--EHVCGGALIDQSWVVSAAHCIQGNKEYLVMLGSSTLQPSGSPWAL-----KI 118

  Fly   234 PYQERSVQTVILHPDY-NRRSIAYDFALVILSQPVTLDDHINVICLPQQDDIPQPGNTCFSTGWG 297
            |     |..:|:||.| .:..|..|.||:.|..|||.:.:|..||||:.:...:.|..|:.||||
  Rat   119 P-----VGDIIMHPKYWGQNFIRSDIALLCLETPVTFNKYIQPICLPEHNFNLKVGMKCWVTGWG 178

  Fly   298 KDAFGSLGKYSSLMK--RVPLPIVEFNSCQTRLRGTRLGPKF--ALDRSFICAGGQRGIDTCQGD 358
            :.......|.:..::  ...:.||:..:|..........|:.  .:.::.||....|. :.|.||
  Rat   179 QAKQHPSAKLTRSLELWEAEVSIVDNKNCDRVFHKKTFYPQVIPLIRKNMICTTNHRE-NPCYGD 242

  Fly   359 GGAPLACPRGSTRESRYQQTGIVAWGIGCNDEVP--AAYANVALVRGWIDQQM 409
            .|.||||    ....|:...||.:|...|. :.|  :.|..:....|||.:|:
  Rat   243 PGGPLAC----EVHGRWILAGIFSWEKACT-KAPNLSVYTRIDKYTGWIKEQV 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 Tryp_SPc 166..408 CDD:238113 68/245 (28%)
Tryp_SPc 169..405 CDD:214473 66/242 (27%)
Prss45NP_001008864.1 Tryp_SPc 57..289 CDD:238113 68/245 (28%)
Tryp_SPc 57..286 CDD:214473 66/242 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 162 1.000 Domainoid score I3893
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.