DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40160 and CG7542

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster


Alignment Length:245 Identity:68/245 - (27%)
Similarity:115/245 - (46%) Gaps:27/245 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 AGFGEFPWTVAL-LHSGNLSYFCAGSLIHKQVVLTAAHCVESLRTGSFTVRAGEW----DTQTMK 230
            |..|:||:...| :..||.|.:|.|:||....::|||||::...  |.||..|..    :::..:
  Fly    33 AEVGQFPYQAGLNVSFGNWSTWCGGTLISHYWIITAAHCMDGAE--SVTVYLGAINIGDESEEGQ 95

  Fly   231 ERLPYQERSVQTVILHPDYNRRSIAYDFALVILSQPVTLDDHINVICLPQQDDIPQP---GNTCF 292
            ||:..::..   :|:|.:|...::..|.:|:.|...|...|.|....||::.:...|   ....|
  Fly    96 ERIMVEKSG---IIVHSNYMASTVVNDISLIRLPAFVGFTDRIRAASLPRRLNGQFPTYESIRAF 157

  Fly   293 STGWGKDAFGSLGKYSSLMKRVPLPIVEFNSCQTRLRGTRLGPKFALDRSFICAGGQRGIDTCQG 357
            ::|||:::..| ...|.:::.|.:||:..:.|:....|       |:....||.....|..||.|
  Fly   158 ASGWGRESDAS-DSVSPVLRYVEMPIMPHSLCRMYWSG-------AVSEKMICMSTTSGKSTCHG 214

  Fly   358 DGGAPLACPRGSTRESRYQQTGIVAWG--IGCNDEVPAAYANVALVRGWI 405
            |.|.||...:|:   |.| ..|..::|  :||....||.:..::....||
  Fly   215 DSGGPLVYKQGN---SSY-LIGSTSFGTSMGCQVGFPAVFTRISSYLDWI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 68/245 (28%)
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 68/245 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.