DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40160 and CG4477

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_648295.1 Gene:CG4477 / 39058 FlyBaseID:FBgn0035971 Length:315 Species:Drosophila melanogaster


Alignment Length:235 Identity:63/235 - (26%)
Similarity:103/235 - (43%) Gaps:34/235 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 SYFCAGSLIHKQVVLTAAHCVESLRTGSFTVR-----AGEWDTQTMKERLPY-QERSVQTVILH- 246
            ::||:|.::....|:|:|||:.:.|....:.|     ||..:      ||.| ..|:..|.:.| 
  Fly    69 NHFCSGVILAPMFVMTSAHCLINKRRVLISSRVLLIVAGTLN------RLKYIPNRTFVTPVTHI 127

  Fly   247 --PDYNRRSIAYDFALVILSQPVTL-DDHINVICLPQQDDIPQPGNTCFSTGWGKDAFGSLGKYS 308
              ||........||.|:.:..|... ::||::..||...  |.||..|...|||:...|  |..:
  Fly   128 WLPDSFTMRNKQDFGLLKVKNPFPRNNEHISIARLPVHP--PLPGLKCKVMGWGRMYKG--GPLA 188

  Fly   309 SLMKRVPLPIVEFNSCQTRLRGTRLGPKFALDRSFICAGGQRGIDTCQGDGGAPLACPRGSTRES 373
            |.|..:.:.:::..:|...||...:....|:|...:.|.     ..|.||.|||: ...|:.   
  Fly   189 SYMLYIDVQVIDSEACAKWLRVPSVEHVCAVDSDDLTAQ-----QPCGGDWGAPM-LHNGTV--- 244

  Fly   374 RYQQTGIVAWGIGCN-DEVPAAYANVALVRGWIDQQMLTN 412
                .|||....||. ..:|:.|.||.....||.::::::
  Fly   245 ----YGIVTILAGCGVSHLPSLYTNVHSNANWIHEKIISS 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 63/229 (28%)
CG4477NP_648295.1 Tryp_SPc 55..276 CDD:238113 63/229 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.