DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40160 and CG1304

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster


Alignment Length:288 Identity:75/288 - (26%)
Similarity:108/288 - (37%) Gaps:76/288 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 PLDQRPNQPRGCGVRNTGGLDFTLSGVSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHKQVVLT 204
            |:...|....|   |..||.|          |...:||..|:|.::|  |:.|.||::.:..|||
  Fly    20 PVHSAPGSLNG---RVVGGED----------AVKNQFPHQVSLRNAG--SHSCGGSILSRNYVLT 69

  Fly   205 AAHCVES---------LRTGSFTVRAGEWDTQTMKERLPYQERSVQTVILHPDYNRRSIAYDFAL 260
            |||||.:         :....||:|||..|..:....:     .|..||:|.:|.  :...|.||
  Fly    70 AAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLV-----QVAEVIVHEEYG--NFLNDVAL 127

  Fly   261 VILSQPVTLDDHINVICLPQQDDIPQPGNTCFSTGWGKDAF-GSLGKYSSLMKRVPLPIVEFNSC 324
            :.|..|:.|...|..|.||.. |.|...:...| |||:... |.|.:|           :::|:.
  Fly   128 LRLESPLILSASIQPIDLPTA-DTPADVDVIIS-GWGRIKHQGDLPRY-----------LQYNTL 179

  Fly   325 QTRLRGTRLGPKFALDR----------SFICAGGQRGIDTCQGDGGAPLACPRGSTRESRYQQTG 379
            ::          .:|:|          |.:|...:.....|.||.|.|..        ...|..|
  Fly   180 KS----------ISLERCDELIGWGVQSELCLIHEADNGACNGDSGGPAV--------YNNQVVG 226

  Fly   380 IV--AWGIGCNDEVPAAYANVALVRGWI 405
            :.  .|. .|....|..||.|.....||
  Fly   227 VAGFVWS-ACGTSYPDGYARVYYHNEWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 68/262 (26%)
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 71/273 (26%)
Blue background indicates that the domain is not in the aligned region.

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