DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40160 and Ser6

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_523426.1 Gene:Ser6 / 33073 FlyBaseID:FBgn0011834 Length:259 Species:Drosophila melanogaster


Alignment Length:280 Identity:76/280 - (27%)
Similarity:113/280 - (40%) Gaps:60/280 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 PLDQRPNQPRGCGVRNTGGLDFTLSGVSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHKQVVLT 204
            |:...|.:..|   |..||.|          |...:||..|:|.::|  |:.|.||::.:..:||
  Fly    20 PVQSAPGKLNG---RVVGGED----------AVKNQFPHQVSLRNAG--SHSCGGSILTRTYILT 69

  Fly   205 AAHCVES---------LRTGSFTVRAGEWDTQTMKERLPYQERSVQTVILHPDYNRRSIAYDFAL 260
            |||||.:         :....||:|||..|..:....:     .|..||:|.:|.  :...|.||
  Fly    70 AAHCVSNEDVNHVITPIAAERFTIRAGSNDRFSGGVLV-----QVAEVIVHEEYG--NFLNDVAL 127

  Fly   261 VILSQPVTLDDHINVICLPQQDDIPQPGNTCFSTGWGKDAF-GSLGKYSSLMKRVPLPIVEFNSC 324
            :.|..|:.|...|..|.||.. |.|...:...| |||:... |.|.:|           :::|:.
  Fly   128 LRLESPLILSASIQPIDLPTV-DTPADVDVVIS-GWGRIKHQGDLPRY-----------LQYNTL 179

  Fly   325 QTRLRGTRLGPKFALDRSF---ICAGGQRGIDTCQGDGGAPLACPRGSTRESRYQQTGIVAWGI- 385
            ::.   ||...:..:|..|   :|...|.....|.||.|.|..        ...|..|:..:.: 
  Fly   180 KSI---TRQQCEELIDFGFEGELCLLHQVDNGACNGDSGGPAV--------YNNQLVGVAGFVVD 233

  Fly   386 GCNDEVPAAYANVALVRGWI 405
            ||....|..||.|...:.||
  Fly   234 GCGSTYPDGYARVFYFKDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 69/254 (27%)
Ser6NP_523426.1 Tryp_SPc 32..256 CDD:238113 72/265 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.