DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG40160 and Prss40

DIOPT Version :9

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001101679.1 Gene:Prss40 / 316318 RGDID:1561330 Length:376 Species:Rattus norvegicus


Alignment Length:359 Identity:86/359 - (23%)
Similarity:136/359 - (37%) Gaps:101/359 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 GFG------VIDIRFNDDDPICPASVDVCCDANRTLNKTLNPTPLDQRPNQPRGCGVRNTGGLDF 161
            |:|      ::.:.|.....:.....||...||.|..:                     ||....
  Rat    13 GYGAALLAALLGLSFLSQHALATEPTDVTSAANNTTTQ---------------------TGKTTL 56

  Fly   162 TLS---GVSQNE--------AGFGEFPWTVALLHSGNLSYFCAGSLIHKQVVLTAAHCVESLRT- 214
            :||   |.:|.:        ||...:||..:|...|.  :.|...||.|..|.:||||.:..|. 
  Rat    57 SLSMVCGKTQFQGKIYGGQIAGAQRWPWQASLRLYGR--HICGAVLIDKNWVASAAHCFQMSRNP 119

  Fly   215 GSFTVRAG--EWDTQTMKERLPYQERSVQTVILHPDYNRRSIAY----DFALVILSQPVTLDDHI 273
            |.:.:..|  :.::.|...|    :.||:.:|:|.|||:   .|    |..|:.|...|....||
  Rat   120 GDYQIMLGYTKLNSPTRYSR----KMSVKKLIVHKDYNK---FYPQGSDIVLLQLHSSVEYSSHI 177

  Fly   274 NVICLPQQD-DIPQPGNTCFSTGWG---KDAFGSLGKYSSLMKRVPLP---------IVEFNSCQ 325
            ...|:|.:: .||:. ..|:::|||   :|.            |:|||         |:..:.| 
  Rat   178 LPACVPNKNITIPKE-KACWTSGWGNLREDV------------RLPLPNDLYEAELIIMSNDDC- 228

  Fly   326 TRLRGTRLGPKFALDRSF------ICAGG---QRGIDTCQGDGGAPLACPRGSTRESRYQQTGIV 381
               :|....|.....:::      :||..   .:.|  |.||.|.||.|    ..|..:...|:.
  Rat   229 ---KGFFPPPVPGSSKTYYIYDDMVCAADYSLTKSI--CSGDSGGPLVC----LLEGSWYVVGLT 284

  Fly   382 AWGIGCNDEV--PAAYANVALVRGWIDQQMLTNG 413
            :|...|.|.:  |:.:|.|:....||......:|
  Rat   285 SWSSSCEDPISSPSVFARVSYFDKWISDNKKASG 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 Tryp_SPc 166..408 CDD:238113 72/280 (26%)
Tryp_SPc 169..405 CDD:214473 69/274 (25%)
Prss40NP_001101679.1 Tryp_SPc 70..310 CDD:214473 69/271 (25%)
Tryp_SPc 71..313 CDD:238113 71/273 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.