DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40160 and Prss34

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001099242.1 Gene:Prss34 / 287140 RGDID:1306667 Length:316 Species:Rattus norvegicus


Alignment Length:256 Identity:81/256 - (31%)
Similarity:116/256 - (45%) Gaps:50/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 FPWTVAL-LHSGNLS---YFCAGSLIHKQVVLTAAHCVE--SLRTGSFTVRAGEW----DTQTMK 230
            |||.|:| .::..||   :.|.|||||.|.|||||||||  .:....|.|:.|:.    :.|.||
  Rat    44 FPWQVSLRFYNMKLSKWEHICGGSLIHPQWVLTAAHCVELKEMEASCFRVQVGQLRLYENDQLMK 108

  Fly   231 ERLPYQERSVQTVILHPDYNRRSIA---YDFALVILSQPVTLDDHINVICLPQQDDIPQPGNTCF 292
                     |..:|.||.::.:..|   .|.||:.|...|.|.:.::.:.||..........|.:
  Rat   109 ---------VAKIIRHPKFSEKLSAPGGADIALLKLDSTVVLSERVHPVSLPAASQRISSKKTWW 164

  Fly   293 STGWGKDAFGSLGKYSSL-----MKRVPLPIVEFNSCQTRLRGTRLGPKFALDRS-------FIC 345
            ..||     |.:..:..|     ::.|.:|||..:.|:.:.|     ...:|||:       .:|
  Rat   165 VAGW-----GVIEGHRPLPPPCHLREVAVPIVGNSDCEQKYR-----TYSSLDRTTKIIKDDMLC 219

  Fly   346 AGGQRGIDTCQGDGGAPLACPRGSTRESRYQQTGIVAWGIGCN-DEVPAAYANVALVRGWI 405
            | |..|.|:||.|.|.||.|....:    :.|.|:|:|||||. .:.|..|..|.....||
  Rat   220 A-GMEGRDSCQADSGGPLVCRWNCS----WVQVGVVSWGIGCGLPDFPGVYTRVMSYLSWI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 81/256 (32%)
Prss34NP_001099242.1 Tryp_SPc 33..276 CDD:238113 81/256 (32%)
Blue background indicates that the domain is not in the aligned region.

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