DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG40160 and CG30088

DIOPT Version :10

Sequence 1:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:274 Identity:74/274 - (27%)
Similarity:113/274 - (41%) Gaps:35/274 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 CGVRNTGGLDFTLSGVSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHKQVVLTAAHCVESLRTG 215
            |||.....:...:  |...||.....|:...|.:|..:  .|.|::|..:.:||||||:...   
  Fly    33 CGVSYESNVATRI--VRGKEAMLKSAPFMAYLYYSSEI--HCGGTIISSRYILTAAHCMRPY--- 90

  Fly   216 SFTVRAGEWDTQTMKE------RLPYQERSVQTVILHPDYNR--RSIAYDFALVILSQPVTLDDH 272
             ..||.||.|.....:      ..|.:|..   ::|...|.|  |.:|.|.||:.||:.:..:.|
  Fly    91 -LKVRLGEHDITRNPDCQGGSCSPPAEEFD---IVLATKYKRFDRFLANDIALLKLSRNIRFNVH 151

  Fly   273 INVICLPQQDDIPQPGNTCFSTGWGKDAFGSLGKYSSLMKRVPLPIVEFNSCQTRLRGTRLGPKF 337
            |..|||..........:...:.|||:.   .....:::::...|...:...|::.|       ..
  Fly   152 IQPICLILNPAAAPNVHEFQAFGWGQT---ETNHSANVLQTTVLTRYDNRHCRSVL-------SM 206

  Fly   338 ALDRSFICAGGQRGIDTCQGDGGAPLACPRGSTRESRYQQTGIVAWGIGCND--EVPAAYANVAL 400
            .:..:.:|.|.| |.|||.||.|.||..........||.|.|||::|   :|  :.|..|..|..
  Fly   207 PITINQLCVGFQ-GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFG---DDKCQSPGVYTYVPN 267

  Fly   401 VRGWIDQQMLTNGF 414
            ...||...|.:||:
  Fly   268 YIRWIRYVMQSNGY 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 68/251 (27%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 67/252 (27%)
Blue background indicates that the domain is not in the aligned region.

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