DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)80Fg and Dnajc30

DIOPT Version :9

Sequence 1:NP_001015187.2 Gene:l(3)80Fg / 3354941 FlyBaseID:FBgn0287183 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_001102494.1 Gene:Dnajc30 / 368190 RGDID:1595783 Length:219 Species:Rattus norvegicus


Alignment Length:80 Identity:28/80 - (35%)
Similarity:42/80 - (52%) Gaps:6/80 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VCS-----SLNDPYAILGINKKATTYEIREAYKELAKKWHPDK-VKNDYGAEKFIQIKLAYEILA 82
            :||     |.|..|.:||:...||..:|:.||...:..:|||: ..:...||:|.:|..||.:|.
  Rat    31 LCSRVRTYSRNALYDLLGVPSTATQAQIKAAYYRQSFLYHPDRNPGSTEAAERFTRISEAYLVLG 95

  Fly    83 DLDRRRIFDRYGVSD 97
            ....||.:||..:||
  Rat    96 STILRRKYDRGLLSD 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)80FgNP_001015187.2 DnaJ 30..>94 CDD:223560 22/64 (34%)
DnaJ 30..91 CDD:278647 20/61 (33%)
TRX_DnaJ 134..244 CDD:239261
Dnajc30NP_001102494.1 DnaJ 43..104 CDD:278647 20/60 (33%)
DnaJ 44..>105 CDD:223560 20/60 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350636
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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