DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)80Fg and Dnajc18

DIOPT Version :9

Sequence 1:NP_001015187.2 Gene:l(3)80Fg / 3354941 FlyBaseID:FBgn0287183 Length:780 Species:Drosophila melanogaster
Sequence 2:XP_006254608.1 Gene:Dnajc18 / 291677 RGDID:1310237 Length:357 Species:Rattus norvegicus


Alignment Length:143 Identity:33/143 - (23%)
Similarity:59/143 - (41%) Gaps:52/143 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YAILGINKKATTYEIREAYKELAKKWHPDKVKNDYGAEKFIQIKLAYEILADLDRRRIFDRYG-- 94
            |.|||::..|:..|:::|||:||.|:||||.......:.|..|..|:.:|::.|:|..:|.||  
  Rat    84 YDILGVSHNASDEELKKAYKKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDE 148

  Fly    95 ----------------------------------------------VSDINSQYFQKKHDYSEYN 113
                                                          |:| :|.|::::|   .:.
  Rat   149 QVTLTAPRARPYHYYRDVEADISPEELFNVFFGGHFPSGNIHMFSNVTD-DSHYYRRRH---RHE 209

  Fly   114 RFTLNQNDDDFGQ 126
            |...::.::|..|
  Rat   210 RTQAHKREEDKSQ 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)80FgNP_001015187.2 DnaJ 30..>94 CDD:223560 23/61 (38%)
DnaJ 30..91 CDD:278647 22/58 (38%)
TRX_DnaJ 134..244 CDD:239261
Dnajc18XP_006254608.1 DnaJ 82..143 CDD:278647 22/58 (38%)
DUF1977 250..349 CDD:286411
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350629
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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