DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)80Fg and dnj-4

DIOPT Version :9

Sequence 1:NP_001015187.2 Gene:l(3)80Fg / 3354941 FlyBaseID:FBgn0287183 Length:780 Species:Drosophila melanogaster
Sequence 2:NP_491558.1 Gene:dnj-4 / 172173 WormBaseID:WBGene00001022 Length:274 Species:Caenorhabditis elegans


Alignment Length:227 Identity:50/227 - (22%)
Similarity:85/227 - (37%) Gaps:59/227 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YAILGINKKATTYEIREAYKELAKKWHPDKVKNDYGAEKFIQIKLAYEILADLDRRRIFD----- 91
            |.:||:...||..||:.|:...:||.|||....:.....|:::|.||::|.....||::|     
 Worm    30 YEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEESATASFLELKNAYDVLRRPADRRLYDYQLRG 94

  Fly    92 ----------RYGVSDINSQY-FQKKHDYSEYNRFTLNQNDDDFGQRFDIKQDIAFYQKLSITEN 145
                      ||...:...|| |.:  |:|.|    .:||.|:         ..:..::...:..
 Worm    95 GGGRYPNGGQRYQYPNTAPQYDFSR--DWSTY----WSQNPDN---------SRSSREERDKSSR 144

  Fly   146 YFEKMILSKNAKKVHVVMFYNDWCFKCTRIVDAFKKILELLQPIGINFATVNAVHEESVFRKCGA 210
            .|.|.|:...|..:.:|..||.                ..|..:..|...::.:.:|....||..
 Worm   145 EFMKSIVKWTAIGLVLVAGYNG----------------GYLYLLAYNQKQLDKLIDEDEIAKCFL 193

  Fly   211 REVPQLVLILDNQYFLYRDHSFTPQKVVEFIR 242
            |:..            :|:.:|...:|.|..|
 Worm   194 RQKE------------FRNANFESSEVAEIGR 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)80FgNP_001015187.2 DnaJ 30..>94 CDD:223560 22/76 (29%)
DnaJ 30..91 CDD:278647 20/58 (34%)
TRX_DnaJ 134..244 CDD:239261 18/109 (17%)
dnj-4NP_491558.1 CbpA 27..>155 CDD:225124 35/139 (25%)
DnaJ 28..89 CDD:365959 20/58 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0715
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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