DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and EIF4A-III

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_188610.1 Gene:EIF4A-III / 821513 AraportID:AT3G19760 Length:408 Species:Arabidopsis thaliana


Alignment Length:389 Identity:137/389 - (35%)
Similarity:228/389 - (58%) Gaps:21/389 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 133
            :..:.:|..:.:|..:|:|:|..||..||.||:.|:..:|..  :::|||:|||||||:...|::
plant    31 IEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQG--RDVIAQAQSGTGKTSMIALSV 93

  Fly   134 LSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRS-KKIEE--HIL 195
            ...|:......|.|.||||.|||.||.:....:|... .|:....:.|..|... :|:|.  |::
plant    94 CQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHA-NIQAHACIGGNSVGEDIRKLEHGVHVV 157

  Fly   196 IGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGK 260
            .||||::.|. ||.|....:.|.:.:|||:|.|: ::|..||...:::.|.|..|:...|||...
plant   158 SGTPGRVCDM-IKRRSLRTRAIKLLILDESDEML-SRGFKDQIYDVYRYLPPDLQVCLVSATLPH 220

  Fly   261 EVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKR 325
            |:::.....:.:|..|.:.|:|.:||.|||::|..:.||.|::.:.::|..:::.||:|||:|||
plant   221 EILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKR 285

  Fly   326 TAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFD 390
            ...:|:.||.|...:|:.:.||:...:|..:::.||||..:|||||::.:||||::||::|:|:|
plant   286 KVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYD 350

  Fly   391 LPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKAESGKIGKEINRSSSGAESGSREMP 454
            ||      .:.|.|:|||||:|||....:..|.    ||::..||.::|.:..|   :...|||
plant   351 LP------NNRELYIHRIGRSGRFGRKGVAINF----VKSDDIKILRDIEQYYS---TQIDEMP 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 67/199 (34%)
SF2_C_DEAD 288..414 CDD:350174 52/125 (42%)
EIF4A-IIINP_188610.1 DEAD-like_helicase_N 32..408 CDD:475120 137/388 (35%)

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