DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and EIF4A1

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001327653.1 Gene:EIF4A1 / 820605 AraportID:AT3G13920 Length:419 Species:Arabidopsis thaliana


Alignment Length:353 Identity:139/353 - (39%)
Similarity:209/353 - (59%) Gaps:30/353 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 KTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRV 137
            ::|:|:.|:.:||:||||.||..||.||:..:......  .::|.|:||||||||.|...:|.::
plant    43 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGVLQQL 105

  Fly   138 NVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEE---HILIGTP 199
            :..|...|.|.|:||.|||.|..:|...:|.:. .:|:...|.|..|...::|.:   |:::|||
plant   106 DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVVGTP 169

  Fly   200 GKLLDWGIKFRLFDMKK--------ISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSA 256
            |         |:|||.|        |.:|||||||.|: ::|..||...|.::|.|..|:..|||
plant   170 G---------RVFDMLKRQSLRADNIKMFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGVFSA 224

  Fly   257 TYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFC 321
            |...|.::..|..::.|..|.:.|:|.:||.|||:||..:.||.|...:.::|..:::.|::||.
plant   225 TMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFV 289

  Fly   322 HTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIV 386
            :|:|...||..||.|..|:|:...||:....|..::..||||..:|||||::|:||||::||::|
plant   290 NTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 354

  Fly   387 VNFDLPVDLDGMADCETYLHRIGRTGRF 414
            :|||||      ...|.|||||||:|||
plant   355 INFDLP------TQPENYLHRIGRSGRF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 75/207 (36%)
SF2_C_DEAD 288..414 CDD:350174 55/125 (44%)
EIF4A1NP_001327653.1 DEAD-like_helicase_N 30..397 CDD:475120 139/353 (39%)

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