DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and ddx19a

DIOPT Version :9

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001122187.1 Gene:ddx19a / 563448 ZFINID:ZDB-GENE-080721-12 Length:471 Species:Danio rerio


Alignment Length:487 Identity:260/487 - (53%)
Similarity:331/487 - (67%) Gaps:31/487 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WAKKAEDQE-VSKLVDKL--------NLDSKSGEETDFDVADPAETSLLIKILGKGLVNTKLSLD 59
            ||...::|| .:|.|..|        :|...:|::.:.:..|.|..|||.|::...|||....::
Zfish     6 WALAVDEQESTTKPVGNLRIMEAENASLHQNNGDDEEDEKEDRATQSLLNKLIRSNLVNNTNQVE 70

  Fly    60 IQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTG 124
            :.|::|||||:||||||.|.||..||||:|.||||.||||||.|||.:||:||||:|||||||||
Zfish    71 VLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTG 135

  Fly   125 KTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKK 189
            |||||||||||.|:......|.||:|||||||:|||:|..:||:|..|:.|.:||||..::|..:
Zfish   136 KTAAFVLAMLSHVDPACKWSQCLCISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGVR 200

  Fly   190 IEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFF 254
            |::.|:|||||.:|||.||.:|.|.|||.||||||||||||||||.||.|||.:||...||||.|
Zfish   201 IKDQIVIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGCQMLLF 265

  Fly   255 SATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAII 319
            |||:...|..||..:|.||.||:|.||||:|:.||||||.|.::|.|:||:.||||.|::.||:|
Zfish   266 SATFEDSVWKFAERVVPDPNIIKLKREEETLDTIKQYYVLCNSKEDKFNALCNIYGAITIAQAMI 330

  Fly   320 FCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVT 384
            ||||::.|.|||.:|:.:||.||:|:|::.|.||..|::|||.|.||||||||:.:||||:|||:
Zfish   331 FCHTRKMANWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVS 395

  Fly   385 IVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKAESGKIGKEINRSSSGAESG 449
            :|:|||||:|.|...|.|||||||||||||                  ||.|..||...|   ..
Zfish   396 VVINFDLPLDKDSNPDNETYLHRIGRTGRF------------------GKRGLAINMVDS---QR 439

  Fly   450 SREMPKEKENISLLKFFSL-TGNLDEAWDVQS 480
            |.|:.|..|.....|...| |.:|||...:.|
Zfish   440 SMEILKTYERHFDKKIARLDTDDLDEIEKIAS 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 129/201 (64%)
DEXDc 88..291 CDD:214692 129/202 (64%)
Helicase_C 299..414 CDD:278689 70/114 (61%)
ddx19aNP_001122187.1 PTZ00424 83..461 CDD:185609 230/398 (58%)
P-loop_NTPase 86..288 CDD:304359 129/201 (64%)
HELICc 299..434 CDD:238034 83/152 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2698
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 526 1.000 Inparanoid score I1199
OMA 1 1.010 - - QHG55249
OrthoDB 1 1.010 - - D254883at33208
OrthoFinder 1 1.000 - - FOG0001995
OrthoInspector 1 1.000 - - otm25223
orthoMCL 1 0.900 - - OOG6_101341
Panther 1 1.100 - - O PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2081
SonicParanoid 1 1.000 - - X1312
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

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