DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and ddx25

DIOPT Version :9

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001016345.1 Gene:ddx25 / 549099 XenbaseID:XB-GENE-958136 Length:479 Species:Xenopus tropicalis


Alignment Length:421 Identity:238/421 - (56%)
Similarity:311/421 - (73%) Gaps:6/421 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EETDFDVADPAETSLLIKILGKGLVNTKLSLDIQQKNPNSPLHSVKTFEALHLKASLLKGIYAMG 92
            ||:|.|  |||..|||.|:|.:.|:::..|:::.|::|.|||.|||:||.||||..||:||||||
 Frog    50 EESDID--DPANQSLLNKLLRRTLIDSSHSVEVSQRDPTSPLFSVKSFEKLHLKDELLRGIYAMG 112

  Fly    93 FNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAI 157
            ||.||||||.|||.:|||||||:||||||||||||||||||||||:....:||.:|||||:|||:
 Frog   113 FNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAMLSRVDAKKTYPQCMCLSPTFELAL 177

  Fly   158 QTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVL 222
            |||:|...||:||..||:.:||||....:..:||..|:|||||.:|||..|.||.::|.||||||
 Frog   178 QTGKVVEEMGKFCNGIKVIYAVRGNRPGKGTQIEAQIVIGTPGTVLDWCFKLRLINVKNISVFVL 242

  Fly   223 DEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLEN 287
            |||||||..|||.|..:|:.:.:...||||.||||:|..|..||..||.||.||:|.:||.:|:|
 Frog   243 DEADVMINVQGHSDHSVRVKRSMPKTCQMLLFSATFGDSVWAFAERIVPDPNIIKLKKEELTLDN 307

  Fly   288 IKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQ 352
            |:|:|.||:|:|.||:|:.|:||.|::.|||:||.|::.|.||:..|..|||.||:|:|:|:|..
 Frog   308 IQQFYDKCENKEQKYSALCNMYGIITIAQAIVFCQTRKIANWLSRHMLEDGHQVALLSGELSVCD 372

  Fly   353 RLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPS 417
            |.:::.|||.|.:|||:|||:.:||||:|||:|||||||||::||..|.|||||||||||||...
 Frog   373 RAEMIQRFREGKDKVLVTTNVCARGIDVEQVSIVVNFDLPVNVDGSVDFETYLHRIGRTGRFGKK 437

  Fly   418 A----LTRNSPIFGVKAESGKIGKEINRSSS 444
            .    |..||.::.:|........:|.:.:|
 Frog   438 GIAVNLIENSFVYMLKEIEEHFNTKIKKLNS 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 128/201 (64%)
DEXDc 88..291 CDD:214692 126/202 (62%)
Helicase_C 299..414 CDD:278689 68/114 (60%)
ddx25NP_001016345.1 PTZ00424 92..466 CDD:185609 217/373 (58%)
P-loop_NTPase 95..297 CDD:304359 128/201 (64%)
HELICc 307..443 CDD:238034 77/135 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 208 1.000 Domainoid score I2811
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 506 1.000 Inparanoid score I1305
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D254883at33208
OrthoFinder 1 1.000 - - FOG0001995
OrthoInspector 1 1.000 - - oto104215
Panther 1 1.100 - - O PTHR47958
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1312
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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