DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and Ddx6

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001102762.1 Gene:Ddx6 / 500988 RGDID:1564560 Length:483 Species:Rattus norvegicus


Alignment Length:425 Identity:132/425 - (31%)
Similarity:225/425 - (52%) Gaps:37/425 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KLSLDIQQKN---PNSPLHSVK--TFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQN 114
            |.:|.:..|:   ..|.:.|.|  .||...||..||.||:.||:..||.|||.::|..|:.  ::
  Rat    73 KKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG--RD 135

  Fly   115 MIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAV 179
            ::|::::||||:.|:::.:|.|:::..::.|.:.:.||.|||:|..::..::.:.....|:....
  Rat   136 ILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATT 200

  Fly   180 RGEEV-DRSKKIEE--HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIA---TQGHHDQC 238
            .|..: |...::::  |::|.|||::||. ||..:..:..:.:.||||||.:::   .|...|..
  Rat   201 GGTNLRDDIMRLDDTVHVVIATPGRILDL-IKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDII 264

  Fly   239 IRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYN 303
            :.:.|    :.|:|.:|||:...|..|....:..|..|.|| ||.:|:.:.|||... .|..|.:
  Rat   265 LTLPK----NRQILLYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYV-TERQKVH 323

  Fly   304 AIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVL 368
            .:..::..:.:.|:||||::.:....||.|::..|:|...:...:....|..|...||:||.:.|
  Rat   324 CLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNL 388

  Fly   369 ITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRN----SPIFGVK 429
            :.|::.:|||||:.|.:|:|||.|      ...|||||||||:|||....|..|    ...|.:|
  Rat   389 VCTDLFTRGIDIQAVNVVINFDFP------KLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLK 447

  Fly   430 AESGKIGKE-------INRSSSGAESGSREMPKEK 457
            :...::|.|       |::|...||..|.....||
  Rat   448 SIEEQLGTEIKPIPSNIDKSLYVAEYHSEPAEDEK 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 59/202 (29%)
SF2_C_DEAD 288..414 CDD:350174 44/125 (35%)
Ddx6NP_001102762.1 SrmB 98..461 CDD:440279 119/377 (32%)

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