DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp80 and CG7878

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster


Alignment Length:421 Identity:126/421 - (29%)
Similarity:207/421 - (49%) Gaps:50/421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 QKNPNSPLHSVKTFEALHLK-ASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGK 125
            :.:|..| :.|.|||....: ..:|:.|..|||:.||.||..|.|.||..  .:||..:|:||||
  Fly   272 ETSPPIP-NPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQG--HDMIGIAQTGTGK 333

  Fly   126 TAAFVLAML------SRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEV 184
            |.||:|..:      |..........||.|:||.|||:|..          .|:| :::.||.:.
  Fly   334 TLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIE----------MEVK-KYSFRGMKA 387

  Fly   185 -------DRSKKIEE-----HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQ 237
                   :|:.:|.:     .|:|.|||:|.|. |...:.|:..|:..||||||.|: ..|...|
  Fly   388 VCVYGGGNRNMQISDLERGAEIIICTPGRLNDL-IMANVIDVSTITYLVLDEADRML-DMGFEPQ 450

  Fly   238 CIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRL-MREEESLENIKQYYVKCKNEEGK 301
            ..::...:.|..|.:..|||:...|...|:..:.:|..:.: ..:..:..::||.....:::..|
  Fly   451 IRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDK 515

  Fly   302 YNAIQN-IYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLE 365
            :|.|.: :....|..:.||||..|..|..|::::|.||.....:.|:...:.|...:...:||:.
  Fly   516 FNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVV 580

  Fly   366 KVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKA 430
            ::|:.|::.|||:|||.:|.|:|:|.|.::      |.|:||:|||||    |..:.:.|.....
  Fly   581 RILVATDVASRGLDIEDITHVINYDFPHNI------EEYVHRVGRTGR----AGRQGTSISFFTR 635

  Fly   431 ESGKIGKEINRSSSGAESGSREMPKEKENIS 461
            |...:.||:......||   :|:|.|..|::
  Fly   636 EDWAMAKELIEILQEAE---QEVPDELHNMA 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 67/215 (31%)
SF2_C_DEAD 288..414 CDD:350174 41/126 (33%)
CG7878NP_649767.1 KH_1 92..152 CDD:459630
DEAD-like_helicase_N 174..663 CDD:475120 126/419 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.