DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and CG7878

DIOPT Version :9

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster


Alignment Length:421 Identity:126/421 - (29%)
Similarity:207/421 - (49%) Gaps:50/421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 QKNPNSPLHSVKTFEALHLK-ASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGK 125
            :.:|..| :.|.|||....: ..:|:.|..|||:.||.||..|.|.||..  .:||..:|:||||
  Fly   272 ETSPPIP-NPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQG--HDMIGIAQTGTGK 333

  Fly   126 TAAFVLAML------SRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEV 184
            |.||:|..:      |..........||.|:||.|||:|..          .|:| :::.||.:.
  Fly   334 TLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIE----------MEVK-KYSFRGMKA 387

  Fly   185 -------DRSKKIEE-----HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQ 237
                   :|:.:|.:     .|:|.|||:|.|. |...:.|:..|:..||||||.|: ..|...|
  Fly   388 VCVYGGGNRNMQISDLERGAEIIICTPGRLNDL-IMANVIDVSTITYLVLDEADRML-DMGFEPQ 450

  Fly   238 CIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRL-MREEESLENIKQYYVKCKNEEGK 301
            ..::...:.|..|.:..|||:...|...|:..:.:|..:.: ..:..:..::||.....:::..|
  Fly   451 IRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDK 515

  Fly   302 YNAIQN-IYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLE 365
            :|.|.: :....|..:.||||..|..|..|::::|.||.....:.|:...:.|...:...:||:.
  Fly   516 FNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVV 580

  Fly   366 KVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKA 430
            ::|:.|::.|||:|||.:|.|:|:|.|.::      |.|:||:|||||    |..:.:.|.....
  Fly   581 RILVATDVASRGLDIEDITHVINYDFPHNI------EEYVHRVGRTGR----AGRQGTSISFFTR 635

  Fly   431 ESGKIGKEINRSSSGAESGSREMPKEKENIS 461
            |...:.||:......||   :|:|.|..|::
  Fly   636 EDWAMAKELIEILQEAE---QEVPDELHNMA 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 69/220 (31%)
DEXDc 88..291 CDD:214692 67/221 (30%)
Helicase_C 299..414 CDD:278689 39/115 (34%)
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 67/215 (31%)
DEXDc 298..505 CDD:214692 67/221 (30%)
Helicase_C 514..624 CDD:278689 40/119 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451479
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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