DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and Rm62

DIOPT Version :9

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:429 Identity:127/429 - (29%)
Similarity:191/429 - (44%) Gaps:73/429 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 QQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGK 125
            |..||      ::.|..:||...::|.|...|:..|:.||....|  :|....|.:..:::|:||
  Fly   275 QVPNP------IQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWP--IAMSGSNFVGIAKTGSGK 331

  Fly   126 TAAFVLAMLSRVNVCLNH--------PQVLCLSPTYELAIQTGEVAARMG--QFCREI------- 173
            |..::|..:..:|   |.        |..|.|:||.|||.|..:||...|  .:.|..       
  Fly   332 TLGYILPAIVHIN---NQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAP 393

  Fly   174 ---KLRFAVRGEEVDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHH 235
               ::|...||.|          |:|.|||:|:|: :.....::|:.:..||||||.|: ..|..
  Fly   394 KGGQMRDLQRGCE----------IVIATPGRLIDF-LSAGSTNLKRCTYLVLDEADRML-DMGFE 446

  Fly   236 DQCIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESL-ENIKQYYVKC---K 296
            .|..:|...:.|..|.|.:|||:.|||...|...:.:...|.:...|.|. .||:|....|   .
  Fly   447 PQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFS 511

  Fly   297 NEEGKYNAIQNIYGCI-SVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRF 360
            .||.....:.:||... |.|:.|||..|||....|...:.|.|.....:.||.:..:|..||..|
  Fly   512 KEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREF 576

  Fly   361 RSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSA-----LT 420
            |||...:|:.|::.:||:|::.:..|:|||.|      .:.|.|:||||||||.....     .|
  Fly   577 RSGKSNILVATDVAARGLDVDGIKYVINFDYP------QNSEDYIHRIGRTGRSNTKGTSFAFFT 635

  Fly   421 RNSPIFGVKAESGK--------IGKEINRSSSGAESGSR 451
            :|:      |:..|        ..:|||.:.......||
  Fly   636 KNN------AKQAKALVDVLREANQEINPALENLARNSR 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 64/221 (29%)
DEXDc 88..291 CDD:214692 65/223 (29%)
Helicase_C 299..414 CDD:278689 42/115 (37%)
Rm62NP_524243.2 PTZ00424 280..656 CDD:185609 119/404 (29%)
DEADc 283..488 CDD:238167 64/221 (29%)
HELICc 499..633 CDD:238034 48/139 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451518
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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