DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp80 and Ddx1

DIOPT Version :9

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:413 Identity:106/413 - (25%)
Similarity:164/413 - (39%) Gaps:102/413 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 MGFNTPSKI-QETALPTLLAD----------------PPQNMIAQSQSG---------TGKTAAF 129
            :.|..|..: :||..|.::..                |....:...|:|         ||..|..
  Fly   213 VAFRLPDNLAKETFYPAVVLKNAEMQFNFGKTDFKYAPGNGFVGACQAGPEHSKANPITGPAAGA 277

  Fly   130 VLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQF--------CREIKLRFAVRGEEVDR 186
            ..|     ....|.||.:.:.|:.|||.||..   ::.:|        .|.:.|...||.||...
  Fly   278 PSA-----KPAPNAPQAIIMEPSRELAEQTYN---QIEKFKYHLSNPEVRSLLLIGGVRLEEQKA 334

  Fly   187 SKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKML------ 245
            ......||::||||:|.:. |...|..:.....|||||||.:: .||:.:...|:||.:      
  Fly   335 QLMQGTHIVVGTPGRLEEM-INSGLVLLTHCRFFVLDEADALL-KQGYTELIDRLHKQIPKITSD 397

  Fly   246 NPHCQMLFFSAT-YGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKC-------------- 295
            ....||:..||| :..||...|..::..||.:.|..|:...|.:  ::|.|              
  Fly   398 GRRLQMVVCSATLHAFEVKKMAERLMHFPTWVDLKGEDAVPETV--HHVVCLVDPQMDTTWQSLR 460

  Fly   296 ------------------KNEEGKYNAIQNIYG--CI------SVGQAIIFCHTKRTAAWLAAKM 334
                              .::|....|::.:.|  |:      ::.:|||||.||:....|...:
  Fly   461 QPIGTDGVHDRDNVHPGNHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFL 525

  Fly   335 TSDG---HSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLD 396
            ...|   :|...|.||....:|.:.|:.|:....|.||.|::.:||:||..:..::|..||    
  Fly   526 RQRGGKHYSCVCLHGDRKPQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLP---- 586

  Fly   397 GMADCETYLHRIGRTGRFEPSAL 419
              .|...|:|||||.||.|...|
  Fly   587 --DDKTNYVHRIGRVGRAERMGL 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 59/226 (26%)
DEXDc 88..291 CDD:214692 62/240 (26%)
Helicase_C 299..414 CDD:278689 39/125 (31%)
Ddx1NP_524212.2 P-loop_NTPase 4..>62 CDD:304359
SPRY_DDX1 91..242 CDD:293933 5/28 (18%)
SrmB 279..>612 CDD:223587 95/347 (27%)
P-loop_NTPase <280..426 CDD:304359 46/155 (30%)
Helicase_C 492..602 CDD:278689 37/115 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451522
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.