DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and CG5589

DIOPT Version :9

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster


Alignment Length:535 Identity:143/535 - (26%)
Similarity:233/535 - (43%) Gaps:106/535 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WAKKAEDQEVSKL-------VDKLNLDSKSGEETDFDVADPAETSLL---------IKILGKGLV 52
            :.||::.:..||.       |.|.....|| ||:|.|..|..|..||         .|...|...
  Fly    16 FTKKSKKEPSSKQQLQPLPEVSKHEEPVKS-EESDKDDEDITEFRLLDGDSSNQPKRKKPKKEKT 79

  Fly    53 NTKLSLDIQQ------------------KNPNSPLHSVKT----FEAL-HLKASLLKGIYAMGFN 94
            .:...|:||:                  ||...|:.|..|    |:.| .|:.:||    :..|:
  Fly    80 LSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLL----SRNFD 140

  Fly    95 TPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHP----QVLCLSPTYEL 155
            .|:.||..|||.||  ..:.::|.:.:|:|||.||:..:::.:..   |.    :.|.|:||.||
  Fly   141 HPTPIQMQALPVLL--QRRALMACAPTGSGKTLAFLTPIINGLRA---HKTTGLRALVLAPTREL 200

  Fly   156 AIQTGEVAARMGQFCREIKLR--FAVRGEEVDRSK----KIEEHILIGTPGKLLDWGIKF----- 209
            |.|   :.....:..||..||  |..:..|..:..    |....||:.||.:     ::|     
  Fly   201 AQQ---IYRECAELTRETGLRTHFISKVSEAKQKHGAECKQRYDILVSTPNR-----VRFLLQQE 257

  Fly   210 -RLFDMKKISVFVLDEADVMIATQGHH---DQCIRIHKML-NPHCQMLFFSATYGKEVMDFARLI 269
             .|.|:..:..||||||| .:..:|.:   :|...|:... ||...:.||||||...|..:|...
  Fly   258 PPLLDLSHVEWFVLDEAD-RLMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRH 321

  Fly   270 VADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKM 334
            :.:...|.:..:..:.|.::|..:...:|.||..||:::.........::|..:|..|..|..::
  Fly   322 LKNLVRITIGVQNSATETVQQELLFVGSEGGKLVAIRDLVRQGLQPPVLVFVQSKERAKQLFEEL 386

  Fly   335 TSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMA 399
            ..||.:|.|:..:.:..||.:.:..||.|...|||.|.::.||||.:.|.:|:|:|.|      .
  Fly   387 LYDGINVDVIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGVNLVINYDFP------P 445

  Fly   400 DCETYLHRIGRTGRF------------EPSALTRNSPIFGVKAESGKIG------KEINRSSSGA 446
            ...:|:||||||||.            |.::..|...:. :|...|.:.      |::.:|.:..
  Fly   446 TTISYIHRIGRTGRAGRPGRAITFFTQEDTSNLRGIALI-IKNSGGTVPEYMLQMKKVRKSEAKM 509

  Fly   447 ESGSREMPKEKENIS 461
            .:   :.|.::|:||
  Fly   510 RA---KKPLDREDIS 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 64/222 (29%)
DEXDc 88..291 CDD:214692 61/222 (27%)
Helicase_C 299..414 CDD:278689 38/114 (33%)
CG5589NP_649009.1 SrmB 87..594 CDD:223587 124/463 (27%)
P-loop_NTPase 123..329 CDD:304359 64/223 (29%)
HELICc 349..469 CDD:238034 40/125 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451516
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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