DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and CG6418

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster


Alignment Length:370 Identity:108/370 - (29%)
Similarity:193/370 - (52%) Gaps:29/370 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SLDIQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQS 121
            :|.::...| ||...|.:|........|:|.:....:..|:.||..|:||.|:.  :::|..:::
  Fly   254 TLGVKVTGP-SPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSG--RDIIGIAKT 315

  Fly   122 GTGKTAAFVLAMLSRVNVCLNHPQV--------LCLSPTYELAIQTGEVAARMGQFCREIKLRFA 178
            |:||||||:..||..|   ::..|:        |.|:||.||::|....|.:.|:......:...
  Fly   316 GSGKTAAFIWPMLMHV---MDQKQLKPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCY 377

  Fly   179 VRGEEVDRSKKIEE--HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRI 241
            ..|.:.::||.:|:  .|::.|||:::|. :|.:..::::::..||||||.|. ..|...|...|
  Fly   378 GGGSKWEQSKALEQGAEIIVATPGRMIDM-VKMKATNLRRVTFLVLDEADRMF-HMGFEPQVRSI 440

  Fly   242 HKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREE--ESLENIKQYYVKCKNEEGKYN- 303
            ...:.|..|.|.||||:.|.:...||.:::||  :|:::.:  |:.::|.|......|...|:| 
  Fly   441 CNHVRPDRQCLMFSATFKKRIERLARDVLSDP--VRIVQGDLNEANQDITQSVYVFPNPLQKWNW 503

  Fly   304 AIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVL 368
            .:.::...:|.|..:||...|..|..::..:....::..:|.||:....|..|:.:|:.....:|
  Fly   504 LLCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDIL 568

  Fly   369 ITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGR 413
            :.|::.:||:||..:..|||:|...|:      ||:.||||||||
  Fly   569 VATDVAARGLDIPHIRNVVNYDTARDI------ETHTHRIGRTGR 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 62/206 (30%)
SF2_C_DEAD 288..414 CDD:350174 38/127 (30%)
CG6418NP_648413.1 SrmB 269..634 CDD:440279 103/354 (29%)

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