DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and eif4a1a

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_938180.1 Gene:eif4a1a / 386634 ZFINID:ZDB-GENE-031030-2 Length:406 Species:Danio rerio


Alignment Length:348 Identity:135/348 - (38%)
Similarity:213/348 - (61%) Gaps:17/348 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VKTFEALHLKASLLKGIYAMGFNTPSKIQETA-LPTLLADPPQNMIAQSQSGTGKTAAFVLAMLS 135
            |.:|:.::|:.:||:||||.||..||.||:.| ||.:..   .::|||:||||||||.|.:::|.
Zfish    31 VDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQ 92

  Fly   136 RVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQF----CREIKLRFAVRGEEVDRSKKIEEHILI 196
            :::|.|...|.:.|:||.|||.|..:|...:|.:    |........|| .:|.:.:....||::
Zfish    93 QIDVELKATQAMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVR-NDVQKLQADVPHIVV 156

  Fly   197 GTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKE 261
            ||||::.|. :..|....|.|.:|.|||||.|: ::|..||...|.:.|....|::..|||..:|
Zfish   157 GTPGRVFDM-LNRRYLSPKYIKMFALDEADEML-SRGFKDQIYEIFQKLATDTQVILLSATMPQE 219

  Fly   262 VMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRT 326
            |::.....:.||..|.:.:||.:||.|:|:|:..:.||.|.:.:.::|..:::.||:||.:|:|.
Zfish   220 VLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRRK 284

  Fly   327 AAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDL 391
            ..||..||.:...:|:.|.||:...:|..::..||||..:|||||::|:||||::||::|:|:||
Zfish   285 VDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 349

  Fly   392 PVDLDGMADCETYLHRIGRTGRF 414
            |.:.      |.|:|||||.|||
Zfish   350 PTNR------ENYIHRIGRGGRF 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 75/201 (37%)
SF2_C_DEAD 288..414 CDD:350174 51/125 (41%)
eif4a1aNP_938180.1 DEAD-like_helicase_N 20..406 CDD:475120 135/348 (39%)

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