DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and tif1

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_594854.1 Gene:tif1 / 2542948 PomBaseID:SPAC1006.07 Length:392 Species:Schizosaccharomyces pombe


Alignment Length:354 Identity:134/354 - (37%)
Similarity:221/354 - (62%) Gaps:14/354 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSR 136
            :.||:.::||..||:||||.||..||.||:.|:..:|.:  ::::||:||||||||.|.:::|.:
pombe    18 IDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGE--RDVLAQAQSGTGKTATFSISVLQK 80

  Fly   137 VNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEV-DRSKKIEE--HILIGT 198
            ::..|...|.|.|:||.|||.|..:|...:|.. ..::....:.|..| |....::.  |:::||
pombe    81 IDTSLKQCQALILAPTRELAQQIQKVVVALGDL-MNVECHACIGGTLVRDDMAALQAGVHVVVGT 144

  Fly   199 PGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQMLFFSATYGKEVM 263
            ||::.|. |:.|......:.:|||||||.|: ::|..||...|.::|.|..|::..|||..::|:
pombe   145 PGRVHDM-IQRRALPTDAVQMFVLDEADEML-SRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVL 207

  Fly   264 DFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYGCISVGQAIIFCHTKRTAA 328
            :.....:.||..|.:.::|.:||.|||:||..:.||.|.:.:.::|..::|.||:|||:|:|...
pombe   208 EVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVD 272

  Fly   329 WLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQVTIVVNFDLPV 393
            ||..::|....:|:.:.||:...||..::..||:|..::||||::|:||||::||::|:|:||| 
pombe   273 WLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLP- 336

  Fly   394 DLDGMADCETYLHRIGRTGRFEPSALTRN 422
                 |:.|.|:|||||.|||....::.|
pombe   337 -----ANRENYIHRIGRGGRFGRKGVSIN 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 72/199 (36%)
SF2_C_DEAD 288..414 CDD:350174 53/125 (42%)
tif1NP_594854.1 DEAD-like_helicase_N 7..392 CDD:475120 134/354 (38%)

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