DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and ddx19b

DIOPT Version :9

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_775365.1 Gene:ddx19b / 192339 ZFINID:ZDB-GENE-020419-30 Length:487 Species:Danio rerio


Alignment Length:498 Identity:251/498 - (50%)
Similarity:332/498 - (66%) Gaps:49/498 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WAKKAEDQEV---------------------------SKLVDKLNLDSKSGEETDFDVADPAETS 41
            ||:..::||.                           :|...|...::...||.|.|  |.|..|
Zfish     6 WAQAVDEQEAAAESISTLQISEKEEKPTAEANGAKTEAKTEAKTEANADKTEEDDKD--DKAAQS 68

  Fly    42 LLIKILGKGLVNTKLSLDIQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPT 106
            ||.|::...||||...:::.|::|:|||:|||:||.|.||..||:|:||||||.||||||||||.
Zfish    69 LLNKLIRSNLVNTTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQETALPM 133

  Fly   107 LLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCR 171
            :||:||||:||||||.|||||||||||||.|:.....|:.||:.||||||:|||:|..:||:...
Zfish   134 MLAEPPQNLIAQSQSRTGKTAAFVLAMLSHVDTENKWPECLCVCPTYELALQTGKVIEQMGKHYP 198

  Fly   172 EIKLRFAVRGEEVDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHD 236
            |::|.:|:||.:::|..|::|.|:|||||.:|||..|.:..|.|||.||||||||||||||||.|
Zfish   199 EVQLVYAIRGNKLERGAKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVFVLDEADVMIATQGHQD 263

  Fly   237 QCIRIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGK 301
            |.:||.:||...||||.||||:.:.|.:||:.||.||.||:|.||||:|:.||||||.|.::|.|
Zfish   264 QSVRIQRMLPKTCQMLLFSATFEETVWNFAKRIVPDPNIIKLKREEETLDTIKQYYVICNSKEEK 328

  Fly   302 YNAIQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEK 366
            :.|:.||||.|::.||:|||||::||.|||.:::.:||.||:|:|::.|.||..|::|||.|.||
Zfish   329 FQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEK 393

  Fly   367 VLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKAE 431
            ||:|||:.:||||:|||::|:|||||||.||..|.|||||||||||||                 
Zfish   394 VLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF----------------- 441

  Fly   432 SGKIGKEINRSSSGAESGSREMPKEKENISLLKFFSLTGNLDE 474
             ||.|..||.:.|.....:....::..|..:.|..  |.:|||
Zfish   442 -GKRGLAINMADSKFSMNTLNRIQDHFNKKIEKLD--TDDLDE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc 75..277 CDD:238167 125/201 (62%)
DEXDc 88..291 CDD:214692 126/202 (62%)
Helicase_C 299..414 CDD:278689 70/114 (61%)
ddx19bNP_775365.1 PTZ00424 99..477 CDD:185609 221/397 (56%)
P-loop_NTPase 102..304 CDD:304359 125/201 (62%)
HELICc 315..450 CDD:238034 83/152 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2698
eggNOG 1 0.900 - - E1_KOG0332
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56032
Inparanoid 1 1.050 526 1.000 Inparanoid score I1199
OMA 1 1.010 - - QHG55249
OrthoDB 1 1.010 - - D254883at33208
OrthoFinder 1 1.000 - - FOG0001995
OrthoInspector 1 1.000 - - otm25223
orthoMCL 1 0.900 - - OOG6_101341
Panther 1 1.100 - - LDO PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2081
SonicParanoid 1 1.000 - - X1312
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.870

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