DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and F57B9.3

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_498514.2 Gene:F57B9.3 / 186440 WormBaseID:WBGene00018997 Length:394 Species:Caenorhabditis elegans


Alignment Length:429 Identity:123/429 - (28%)
Similarity:220/429 - (51%) Gaps:41/429 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LVNTKLSLDIQQKNPNSPLHS----VKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADP 111
            :.:||:::.:...:.:|...:    |::|:.:.||..||:|||..||..||.||::|:...... 
 Worm     1 MTDTKVTISVVDSSSSSKEGNYDEVVESFDDMELKEELLRGIYGFGFEKPSAIQKSAVAPCTTG- 64

  Fly   112 PQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLR 176
             :::..|||:|:|||...::.:|..::....|.||:.|:|...:|.:..|....:|   |.:.:.
 Worm    65 -KDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLG---RNLNVN 125

  Fly   177 FAVRGEEVDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRI 241
            ....|.:.........|:|:|||...|. .|.   .|..:|.:|||||||.|: ::|..||...:
 Worm   126 ATCLGFDTTAENDKISHVLMGTPKDFLS-NIP---SDTSRIKMFVLDEADEML-SKGFKDQIYEV 185

  Fly   242 HKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQ 306
            .:.:....|::..|||...||:|.....:.||..|.:.::|.:||.|:|:|:..:.:|.|:|.:.
 Worm   186 FRSMPQDVQVVLLSATMPSEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLC 250

  Fly   307 NIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITT 371
            ::.......||:|||:|:|....|..::.|....|:...|::...:|.|::..|.|...:||:||
 Worm   251 DLLKTSRETQALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTT 315

  Fly   372 NILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPI-FGVKAESGKI 435
            ::::||::|.: ::::|:|:      ..:.|.|:.|.||.|.|....|    || |..:.:...:
 Worm   316 DLMARGMNIRK-SLIINYDV------SGNMENYMLRNGRQGNFGSKGL----PISFFTENDISDL 369

  Fly   436 GKEINRSSSGAESGSREMPKEKENISLLKFFSLTGNLDE 474
            .|..|..|:..|    |||:     |.|::      |||
 Worm   370 KKIENHYSTRIE----EMPE-----SFLEY------LDE 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 61/196 (31%)
SF2_C_DEAD 288..414 CDD:350174 36/125 (29%)
F57B9.3NP_498514.2 DEAD-like_helicase_N 19..391 CDD:475120 117/407 (29%)

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