DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp80 and eif4a3

DIOPT Version :10

Sequence 1:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_001107349.1 Gene:eif4a3 / 100135173 XenbaseID:XB-GENE-5773453 Length:415 Species:Xenopus tropicalis


Alignment Length:404 Identity:138/404 - (34%)
Similarity:236/404 - (58%) Gaps:26/404 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TKLSLDIQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQ 118
            ||:..:..::...:|     ||:.:.|:..||:||||.||..||.||:.|:..::..  :::|||
 Frog    28 TKVEFETSEEVDVTP-----TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKG--RDVIAQ 85

  Fly   119 SQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEE 183
            |||||||||.|.:::|..:::.:...|.|.|:||.|||.|..:|...:|.: ..::....:.|..
 Frog    86 SQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDY-MNVQCHACIGGTN 149

  Fly   184 VDRS-KKIE--EHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKML 245
            |... :|::  :|::.||||::.|. |:.|....:.|.:.||||||.|: .:|..:|...:::.|
 Frog   150 VGEDIRKLDYGQHVVAGTPGRVFDM-IRRRSLRTRAIKMLVLDEADEML-NKGFKEQIYDVYRYL 212

  Fly   246 NPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYG 310
            .|..|:...|||...|:::.....:.||..|.:.|:|.:||.|||::|..:.||.|::.:.::|.
 Frog   213 PPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYD 277

  Fly   311 CISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNILS 375
            .:::.||:|||:|||...||..||.....:|:.:.||:...:|..::..||||..:|||:|::.:
 Frog   278 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 342

  Fly   376 RGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKAESGKIGKEIN 440
            ||:|:.||::::|:|||      .:.|.|:|||||:||:....:..|.    ||.:..:|.::|.
 Frog   343 RGLDVPQVSLIINYDLP------NNRELYIHRIGRSGRYGRKGVAINF----VKNDDIRILRDIE 397

  Fly   441 RSSSGAESGSREMP 454
            :..|   :...|||
 Frog   398 QYYS---TQIDEMP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 69/199 (35%)
SF2_C_DEAD 288..414 CDD:350174 49/125 (39%)
eif4a3NP_001107349.1 DEAD-like_helicase_N 39..415 CDD:475120 136/393 (35%)
Q motif 42..70 15/32 (47%)
DEAD box. /evidence=ECO:0000305 191..194 2/2 (100%)

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