Protein Alignment vtd and SYN3

DIOPT Version :10

• Sequence 1: NP_001015132.1
• Gene: vtd / 3354896
• FlyBaseID: FBgn0260987
• Length: 715
• Species: Drosophila melanogaster
• Sequence 2: NP_191514.1
• Gene: SYN3 / 825124
• AraportID: AT3G59550
• Length: 693
• Species: Arabidopsis thaliana
• Alignment Length: 805
• Identity: 194/805 - (24%)
• Similarity: 307/805 - (38%)
• Gaps: 217/805 - (26%)

  Fly     1 MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLLLGVVR 65
            |||.|.:||:||||..:|.|||..:::.|:.....||..:|:.|:.|:|.||||||.|||:||||
plant     1 MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLLVGVVR 65

  Fly    66 IYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEGHREANVNAITLPEVFH--DFDTALPELNDID 128
            |||:|..||..|.|.....:..||....|:|||..|:|...::|||:..:  :||     |.|..
plant    66 IYSKKVDYLYNDWNLLNTWVAKAFVSTQVNLPEDARQAPPESVTLPQALNLDEFD-----LEDDT 125

  Fly   129 IEAQFSINQSRADEITMREDYGSLSLSLQDDGFGDIGFEAETPEIIRCSIPSNINDKI---FDND 190
            ::.:|. |.:|::|          .::|.|                  .||:.|:..:   ||.|
plant   126 LDMEFD-NHTRSEE----------DITLTD------------------QIPTGIDPYVAVTFDED 161

  Fly   191 VLENIESLDPHSLDAHADMPGSRLDGD--------------------GFGDSFGQPALFEDDL-- 233
            ::.  ||: |..:|...: |.||..|:                    .|......|....::.
plant   162 IIS--ESI-PMDVDQSTE-PVSRHTGEIDVETAHETGPDNEPRDSNIAFDTGTYSPRNVTEEFTE 222

  Fly   234 FGDPSQPVEQITKESTTVLNADDSD----------EDAIDNIHNV-PSPATSLVNSIEDEKEENN 287
            ..||.|  ..:|:|  .:.|::.:|          |...|..|:: |:...|.....:|.:.|..
plant   223 VQDPRQ--SNLTEE--RIPNSERNDATSPGTVPEIERMRDAAHDLSPTSHPSFAAQQQDVRVERT 283

  Fly   288 LNGHASVSENVP----MNEITLVQNEDEGFAL---------------------AP---LDVSMYK 324
            .:...:::|..|    ::|..|.......|.|                     :|   |..|...
plant   284 ESLDETLNEKEPTIPSIDEEMLNSGRHSAFELRSGSPGSAAGSEEERADFVHPSPQLVLQPSPPP 348

  Fly   325 GVTKAKRKRKLIIDEIKNISGEEMKAQLADTSDILTTLDLAPPTKRLMYWKETGGVEKLFSLPSR 389
            ...:..|||| ..|.:..::.:.:..:|.|.||.|......|.:| |.:|:......|
plant   349 QPQRRARKRK-NFDGVTVLTNKNISERLKDPSDTLRKRKKMPSSK-LKFWRMNNQSRK------- 404

  Fly   390 SIPARALFGNYNRQLFSHSTFFEDFSSVVPMEILALEFYTKENENAL-------------IIFNK 441
                   ..|:|..||  :.|.:|..:|...:.:|.:.:...::..|             :..|.
plant   405 -------DQNFNEPLF--TGFSDDLRNVFEKDYVASKPHLAVSDETLPEPASVSPTREAEVEINP 460

  Fly   442 KGRKRKNDNMSNLFLDHVPDSVVQ---SLEAPEVLRANHKSLGVSTVSVEIVSKEQESISCQNEL 503
            ......:.|         |||.||   :.:..:||    .|.|......|.|:.|.:|...
plant   461 VSPIPDSTN---------PDSTVQLSPAQQTEDVL----DSAGPRPAHAESVATEAQSPRT---- 508

  Fly   504 TFFDNMRSPDLLSLNEMEQFSSINELPLTPRNMNHEMGDDFNQGDSTPAGLDHGHATPQHGNIGE 568
              |||    |.:.:..:........:|..|...:....|||               |.|.||
plant   509 --FDN----DDMGIEHLRDGGFPVYMPSPPPRSSPFRTDDF---------------TTQSGN--- 549

  Fly   569 MDHDSVIPTKKTAVILNESVGTSVLSDNGVSKRTNNILKGWDNYEIPSFVGQNH--GDEQMENET 631
            .:.:|......|:.:..:..|...|..:.||:||:..|     |.:.  ||.|.  |       |
plant   550 WETESYRTEPSTSTVPEDLPGQRNLGLSPVSERTDEEL-----YFLE--VGGNSPVG-------T 600

  Fly   632 DEQFEERVLNKRAAHLFIDVRAHFIAKDS-------------LELSQLTSGNSRKQAAQKFYSLL 683
            ....:...|..||..|     |.::.:.|             |.||::.:|.:||.||:.|:..|
plant   601 PASQDSAALTGRARAL-----AQYLKQRSSSSPTTSSHPSGDLSLSEILAGKTRKLAARMFFETL 660

  Fly   684 VLKKFKVLHIDQSAPYADITITRGP 708
            |||...::.:.|..||.||.:...|
plant   661 VLKSRGLIDMQQDRPYGDIALKLMP 685

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vtd	NP_001015132.1	Rad21_Rec8_N	1..103	CDD:461446	49/101 (49%)
		Rad21_Rec8_M_NXP1-like	327..404	CDD:439294	17/76 (22%)
		Rad21_Rec8	657..710	CDD:335912	20/65 (31%)
SYN3	NP_191514.1	Rad21_Rec8_N	1..104	CDD:461446	49/102 (48%)
		Rad21_Rec8_M_AtSYN1-like	352..431	CDD:439295	22/96 (23%)
		Rad21_Rec8	636..687	CDD:335912	19/50 (38%)