Protein Alignment vtd and Rad21l1

DIOPT Version :10

• Sequence 1: NP_001015132.1
• Gene: vtd / 3354896
• FlyBaseID: FBgn0260987
• Length: 715
• Species: Drosophila melanogaster
• Sequence 2: NP_001417679.1
• Gene: Rad21l1 / 689823
• RGDID: 1587557
• Length: 552
• Species: Rattus norvegicus
• Alignment Length: 737
• Identity: 248/737 - (33%)
• Similarity: 344/737 - (46%)
• Gaps: 215/737 - (29%)

  Fly     1 MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLLLGVVR 65
            |||.|::::|:||||:|||||||:||:|||||||.|:|.:::.|:.||||:||||||||||||||
  Rat     1 MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIQKIISPKVKIALRTSGHLLLGVVR 65

  Fly    66 IYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEGHREANVNAITLPEVFHDFDTALPELNDIDIE 130
            ||:||||||||||:|||:|:||.||||:||||:.:.||..|.|||||.|||||  :...|||||.
  Rat    66 IYNRKAKYLLADCSEAFLKMKMTFRPGLVDLPKENFEAAYNTITLPEEFHDFD--IYNTNDIDIS 128

  Fly   131 AQFSINQSRADEITMREDYGSLSLSLQDDGFGDIGFEAETPEIIRCSIPSNINDKIFDNDVLENI 195
            ...:.||||.:|||:||:| |..|..|...|||      .||::|       ....||:::|.|.
  Rat   129 EPLAQNQSRPEEITLREEY-STDLLFQTGSFGD------EPELLR-------RHSFFDDNILMNS 179

  Fly   196 ESL-DPHSLDAHADMPGSRLD-GDGFGDSFG-----------QPALFED-----DLFGDPSQPVE 242
            ..| ..||..:..:......| ||||||...           :...|||     ::|..|..|
  Rat   180 SGLVVEHSSGSLTEEKSLFFDNGDGFGDEGAAGEMIDHLLQDENTFFEDTYLNKEVFLPPEVP-- 242

  Fly   243 QITKESTTVLNADDSDEDAIDNIHNVPSPATSLVNSIEDEKEENNLNGHASVSENVPMNEITLVQ 307
                 |:.::...:||:      |.:|          ||||                :|||||:.
  Rat   243 -----SSVMVEPGNSDD------HYIP----------EDEK----------------INEITLIS 270

  Fly   308 NEDEGFALAPLDVSMYKGV----TKAKRKRKLIIDEIKNISGEEMKAQLADTSDILTTLDLAPPT 368
            ||:|||.|.|:|     |:    .:.::||:|:||.:|.||.:.|..||....|.|..|||||||
  Rat   271 NEEEGFTLDPID-----GLDIADRRKRKKRRLLIDPVKEISSKTMHKQLTSFMDTLMVLDLAPPT 330

  Fly   369 KRLMYWKETGGVEKLFSLPSRSIPARALFGNYNRQLFSHSTFFEDFSSVVPMEILALEFYTKENE 433
            :|||.||:.||||.|.|..::.:....|     :.||::.....|:...   ::...|...||..
  Rat   331 QRLMMWKKRGGVETLLSTATQDLINEDL-----KMLFANCFLSSDYKLA---KLTLKESLRKEVG 387

  Fly   434 NALIIFNKKGRKRKNDNMSNLFLDHVPDSVVQSLEAPEVLRANHKSLGV----STVSVEIVSKEQ 494
            |                      .|:.|..|  :|.|.    :|..||.    ..|:.|.:...|
  Rat   388 N----------------------QHILDPSV--VEEPN----SHSELGQPQDGKDVTDESMGSFQ 424

  Fly   495 ESISCQNELTFFDNMRSPDLLSLNEMEQFSSINELPLTPRNMNHEMGDDFNQGDSTPAGLDHGHA 559
            |:|:                                   ||:|.:.
  Rat   425 ENIN-----------------------------------RNINSKQ------------------- 435

  Fly   560 TPQHGNIGEMDHDSVIPTKKTAVILNESVGTSVLSDNGVSKRTNNILKGWDNYEIPSFVGQNHGD 624
                 :|.||    :.|..:         |.|::|                    .|...:||..
  Rat   436 -----DILEM----ISPAAE---------GFSLVS--------------------ASSAQENHPA 462

  Fly   625 EQMENETDEQFEERVLNKRAAHLFIDVRA-HFIAKDSLELSQLTSGNSRKQAAQKFYSLLVLKKF 688
            |...:.:.:..|....|:|......::|. :.:......|.:|...:.|||||.|||:||:|||.
  Rat   463 ELESSGSKQNTEAEKWNQRLFQTLNELREFNKMGMQFFSLIKLCRNSDRKQAAAKFYTLLILKKH 527

  Fly   689 KVLHIDQSAPYADITITRGPTF 710
            :.:.:.|||||||:..|.||.|
  Rat   528 RAIELSQSAPYADVIATVGPMF 549

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vtd	NP_001015132.1	Rad21_Rec8_N	1..103	CDD:461446	72/101 (71%)
		Rad21_Rec8_M_NXP1-like	327..404	CDD:439294	32/76 (42%)
		Rad21_Rec8	657..710	CDD:335912	25/52 (48%)
Rad21l1	NP_001417679.1	None