Protein Alignment vtd and rec8b

DIOPT Version :10

• Sequence 1: NP_001015132.1
• Gene: vtd / 3354896
• FlyBaseID: FBgn0260987
• Length: 715
• Species: Drosophila melanogaster
• Sequence 2: XP_068073217.1
• Gene: rec8b / 678633
• ZFINID: ZDB-GENE-060421-4898
• Length: 565
• Species: Danio rerio
• Alignment Length: 616
• Identity: 118/616 - (19%)
• Similarity: 215/616 - (34%)
• Gaps: 211/616 - (34%)

  Fly     2 FYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQ-------------PKVKLAL 53
            :|.:::....|..:.|||||....:|::....:.|:.::.|.|:.             |:.:.:|
Zfish     3 YYPNVLQRHTGCFSTIWLAATKGIRISRRDYLKVNVRRTCEDIVDYVMVQVPPVHPSLPRPRFSL 67

  Fly    54 RTSGHLLLGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEGHREANVNAITLPEVFHDFD 118
            ..|..|..||:.:|.|:..:||.:..:...::..:.|...:|:|:..|    ..:.:|:.....:
Zfish    68 YLSSQLQYGVIIVYHRQCAFLLEEVQQTIERLLRSKRHLNIDMPDNDR----LVLNVPDSLFQLE 128

  Fly   119 TALPELNDIDIEAQFSIN---------------QSRADEITMREDYGS--------LSLSLQD-- 158
            .|     :..:|..|.:.               .|.:..:|..::..|        .:::::|
Zfish   129 EA-----EWALEPFFGVMGVDCVPSPCLSSQQFMSASSPLTHTKEITSPKGLVASPETITIKDAE 188

  Fly   159 ------DGFGDIGFEAETPEIIRCSIPSNINDKIFDNDVLENIESLDPHSLD---------AHAD 208
                  ..||.    ||.||.....|           |:|  :|..|...|:         |.|:
Zfish   189 LVPVLAAEFGG----AELPEATAHEI-----------DLL--MEQQDQFHLEDEDKERERVADAE 236

  Fly   209 MPGSRLDGDGFGDSFGQPALFEDDLFGDPSQPVEQITKESTTVLNADDS--DEDAIDNI--HNVP 269
            ..|| ||          ||:..          :||: |.|..:::..:.  .|..:|.:  ...|
Zfish   237 KSGS-LD----------PAMVS----------IEQL-KNSECLMDEGNGRFTEVTLDRVALEMTP 279

  Fly   270 SPATSLVNSIEDEKE-ENNLNGHASVSENVPMNEITLVQNEDEGFALAPLDVSMYKGVTKAKRKR 333
            .|.|....:...|:: |...:...:..::||:.                          :..|||
Zfish   280 PPITMTTTTDASERDVEMESSETLTAEQSVPLK--------------------------RRGRKR 318

  Fly   334 KLII-DEIKNISGEEMKAQ----LADT---SDILTTLD----------LAPPTKRLMY------W 374
            :||. |:...||.:.|:.|    |.:|   ||:|.::.          |:.|...|::      |
Zfish   319 QLIFADQNTQISQDAMRQQINNPLTETQSLSDVLQSIPASRKASAAVLLSTPCNLLIHPDLQTLW 383

  Fly   375 KETGGVEKLFSLPSRSIPARALFGNYNRQLFSHSTFFE-------DFSSVVPMEILALEFYTKEN 432
            |.. .|....|.|||           .||....|...|       :.|.....|::      :|:
Zfish   384 KSC-SVSSTLSRPSR-----------KRQAKKESELMEREKERGVERSRESSREVI------RES 430

  Fly   433 ENALIIFN-----------KKGRKRKNDNMSNLFLDHVPDSVVQSL-EAP---EVLRANHKSLGV 482
            |.||::..           .||.:..:|.::       |:|....: |||   ||:...|..|.:
Zfish   431 EAALVLSESSAASDVPLDVSKGDRSPSDLIT-------PNSRWSPIEEAPVSMEVILEEHVDLPL 488

  Fly   483 STVSVEIVSKEQES--------ISCQNELTF 505
            ....:|:.....|.        |.|:.::.|
Zfish   489 GEAELEMSDIITEDLFRLITGFIECRGKVGF 519

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vtd	NP_001015132.1	Rad21_Rec8_N	1..103	CDD:461446	25/113 (22%)
		Rad21_Rec8_M_NXP1-like	327..404	CDD:439294	26/100 (26%)
		Rad21_Rec8	657..710	CDD:335912
rec8b	XP_068073217.1	Rad21_Rec8_N	1..115	CDD:461446	24/111 (22%)
		Rad21_Rec8_M_Rec8	313..388	CDD:439296	20/75 (27%)