DRSC/TRiP Functional Genomics Resources

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Protein Alignment vtd and vtd

DIOPT Version :10

Sequence 1:NP_001015132.1 Gene:vtd / 3354896 FlyBaseID:FBgn0260987 Length:715 Species:Drosophila melanogaster
Sequence 2:XP_061508733.1 Gene:vtd / 1274701 VectorBaseID:AGAMI1_012482 Length:804 Species:Anopheles gambiae


Alignment Length:827 Identity:396/827 - (47%)
Similarity:501/827 - (60%) Gaps:135/827 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFYEHIILAKKGPLARIWLAAHWDKKITKAHVFETNIEKSVEGILQPKVKLALRTSGHLLLGVVR 65
            |||.||:|||||||||||||||||||||||||||||||:||:||:||||||||||||||||||||
Mosquito     1 MFYAHIVLAKKGPLARIWLAAHWDKKITKAHVFETNIEQSVDGIMQPKVKLALRTSGHLLLGVVR 65

  Fly    66 IYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEGHREANVNAITLPEVFHDFDTALPELNDIDIE 130
            ||:||||||||||||||||||||||||||||||.||||.|||||||||||||||.||||||:|||
Mosquito    66 IYARKAKYLLADCNEAFVKIKMAFRPGMVDLPEEHREAAVNAITLPEVFHDFDTPLPELNDVDIE 130

  Fly   131 AQFSINQSRADEITMREDYGSLSLSLQDDGFGDIGFEAETPEIIRCSIPSNINDKIFDNDV---- 191
            |.||||||||||||||||||:|.|::.||||||:||: :.|:::|..:...:.|.:|.:.|    
Mosquito   131 AHFSINQSRADEITMREDYGTLPLNIHDDGFGDMGFD-DAPDMVRDRMDDQMEDDLFTDTVTRPP 194

  Fly   192 -LEN------------IESLDPHSLDAHADMPGSRLDGDGFGDS--FGQPA--LFEDDLFGDPSQ 239
             ||.            ::|:|||  ..|.       |.|.|||.  .||||  |||.|:|.|...
Mosquito   195 DLEQDKEPMPGTSRSLLDSIDPH--HPHG-------DDDNFGDEDFGGQPAAGLFEGDIFADAPL 250

  Fly   240 PVEQITKESTTVLNADDSDEDAID--NIHNVPSPATSLVN------------------------- 277
            ..|.....:.|...|||||:|..|  ::...||||.|..|                         
Mosquito   251 APEPELPTAETQRRADDSDDDDDDHFDMGGAPSPAPSTDNSRPASPMINNALVDGEPQPGTSKDA 315

  Fly   278 -SIEDEK---------EENNLNGHASV--SENVPMNEITLVQNEDEGFALAPLDVSMYKGVTKAK 330
             |:|.::         .:|..:|...|  :|..| ::.||:.||:|.|||||:|.:..||.||:|
Mosquito   316 MSVEGQQLHPETGLPISQNREDGDDGVGGNEGHP-DQTTLLNNEEESFALAPVDATALKGTTKSK 379

  Fly   331 RKRKLIIDEIKNISGEEMKAQLADTSDILTTLDLAPPTKRLMYWKETGGVEKLFSLPSRSIPARA 395
            ||||||:||:|||||||||:|||:||||:|||||||||||||:|||||||||||:||||.||||.
Mosquito   380 RKRKLIVDEVKNISGEEMKSQLANTSDIVTTLDLAPPTKRLMFWKETGGVEKLFALPSRDIPARC 444

  Fly   396 LFGNYNRQLFSHSTFFEDFSSVVPMEILALEFYTKENENALIIFNKKGRKRKNDNMSNLFLDHVP 460
            ||.||.|.|.|.|...|||:.:.|:::|.:|...:..|:...:.:|:|||||..          |
Mosquito   445 LFKNYQRHLTSRSIGIEDFAVLAPLDVLGVELPVERAESPTPVASKRGRKRKQQ----------P 499

  Fly   461 DSV-----VQSLEAPEVLRANHKSLGVSTVSVEIVSKEQESISCQNELTFFDNMRSPDLLSLNE- 519
            ::.     ::...:.::..|..:....:.||:|:......:.:.|:. :|.....:|.|..|.. 
Mosquito   500 EAASTQGFLEQSASDQLRNAAGEMPPPTPVSIEMREDGLAADATQSS-SFMPPPATPGLSHLTSP 563

  Fly   520 ------MEQFSSINELPLTPRNMNH---------------EMG--------DDFNQGDSTPA--- 552
                  |.....|..:|:||..::|               .:|        .|.:.|..|||   
Mosquito   564 NHQSHLMPPTPGIPNIPMTPGQLDHGGLTPAGLSHGGELTPVGLSHGGLTPSDLHHGGLTPAGLQ 628

  Fly   553 -----------GLDHGHATPQHGNIGEMDHDSVIPTKKTAVILNESVGTSVLSDNGVSKRTN-NI 605
                       |||||..||.|.::..:|....:|..:.:.||||. |....|:.|....|: .|
Mosquito   629 HGDLGGGMTPHGLDHGGMTPHHASLENIDQIPNLPADQVSSILNEP-GMEGFSNMGFDGNTSEEI 692

  Fly   606 LKGWD-NYEIPSFVGQNH-GDEQMENETDEQFEERVLNKRAAHLFIDVRAHFIAKDSLELSQLTS 668
            ...|: :||.|..||..| .:||..:||.|||||||||||||.:|:.|::..:..|.:.||::|.
Mosquito   693 ANDWNGDYEFPPSVGATHPNEEQQVDETIEQFEERVLNKRAAQMFLSVKSRLLKADHMMLSEMTH 757

  Fly   669 GNSRKQAAQKFYSLLVLKKFKVLHIDQSAPYADITITRGPTFENPKI 715
            .|::|||||||||||||||||.|.|.|..||.|||:||||.|:|||:
Mosquito   758 RNNKKQAAQKFYSLLVLKKFKALEISQKQPYDDITVTRGPLFDNPKL 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vtdNP_001015132.1 Rad21_Rec8_N 1..103 CDD:461446 94/101 (93%)
Rad21_Rec8_M_NXP1-like 327..404 CDD:439294 64/76 (84%)
Rad21_Rec8 657..710 CDD:335912 34/52 (65%)
vtdXP_061508733.1 None

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